X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FNJTree.java;fp=src%2Fjalview%2Fanalysis%2FNJTree.java;h=a8ca3f7056c9f88e7e9c32283ebeaedc9ce8d0ce;hb=7ab5d6b0ba5fec1ea4a4239e79c476d841622485;hp=b956b7ad22508cd783f7a096ca5bbab5ac322628;hpb=1889827c44c51f6353fe8619e5d44b421158af23;p=jalview.git

diff --git a/src/jalview/analysis/NJTree.java b/src/jalview/analysis/NJTree.java
index b956b7a..a8ca3f7 100644
--- a/src/jalview/analysis/NJTree.java
+++ b/src/jalview/analysis/NJTree.java
@@ -724,19 +724,18 @@ public class NJTree
    */
   public float[][] findDistances()
   {
-    
+
     float[][] distance = new float[noseqs][noseqs];
 
-      // Pairwise substitution score (with no gap penalties)
-      ScoreModelI _pwmatrix = ResidueProperties.getScoreModel(pwtype);
-      if (_pwmatrix == null)
-      {
-        _pwmatrix = ResidueProperties.getScoreMatrix("BLOSUM62");
-      }
-      distance = _pwmatrix.findDistances(seqData);
+    // Pairwise substitution score (with no gap penalties)
+    ScoreModelI _pwmatrix = ResidueProperties.getScoreModel(pwtype);
+    if (_pwmatrix == null)
+    {
+      _pwmatrix = ResidueProperties.getScoreMatrix("BLOSUM62");
+    }
+    distance = _pwmatrix.findDistances(seqData);
     return distance;
 
-
   }
 
   /**