X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FParseProperties.java;h=38d83715cbc65538e04c74ac66e6893f0504fdd1;hb=d07fe6a0891b57a9d707e356f7769395ce94b0da;hp=3649a29a2f06757c4c05fc78434528c7fd776378;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git

diff --git a/src/jalview/analysis/ParseProperties.java b/src/jalview/analysis/ParseProperties.java
index 3649a29..38d8371 100644
--- a/src/jalview/analysis/ParseProperties.java
+++ b/src/jalview/analysis/ParseProperties.java
@@ -1,19 +1,22 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.analysis;
 
@@ -152,29 +155,4 @@ public class ParseProperties
     }
     return count;
   }
-
-  public static void main(String argv[])
-  {
-    SequenceI[] seqs = new SequenceI[]
-    { new Sequence("sq1", "THISISAPLACEHOLDER"),
-        new Sequence("sq2", "THISISAPLACEHOLDER"),
-        new Sequence("sq3", "THISISAPLACEHOLDER"),
-        new Sequence("sq4", "THISISAPLACEHOLDER") };
-    seqs[0].setDescription("1 mydescription1");
-    seqs[1].setDescription("mydescription2");
-    seqs[2].setDescription("2. 0.1 mydescription3");
-    seqs[3].setDescription("3 0.01 mydescription4");
-    // seqs[4].setDescription("5 mydescription5");
-    Alignment al = new Alignment(seqs);
-    ParseProperties pp = new ParseProperties(al);
-    String regex = ".*([-0-9.+]+)";
-    System.out.println("Matched "
-            + pp.getScoresFromDescription("my Score",
-                    "my Score Description", regex, true) + " for " + regex);
-    regex = ".*([-0-9.+]+).+([-0-9.+]+).*";
-    System.out.println("Matched "
-            + pp.getScoresFromDescription("my Score",
-                    "my Score Description", regex, true) + " for " + regex);
-    System.out.println("Finished.");
-  }
 }