X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FRna.java;h=89c5c3076132b74e46bf6613fb7141d1ccd7eb35;hb=853624fb32058cccc544ae7d13af6ad4b0800b6c;hp=7c077088af2c9ce76661c8e13dcf09c22069f9d9;hpb=9c1dd670f293d8f33de55133397b4cd2d4baf38e;p=jalview.git

diff --git a/src/jalview/analysis/Rna.java b/src/jalview/analysis/Rna.java
index 7c07708..89c5c30 100644
--- a/src/jalview/analysis/Rna.java
+++ b/src/jalview/analysis/Rna.java
@@ -359,8 +359,8 @@ public class Rna
   }
 
   /**
-   * Answers true if the base-pair is either a canonical (A-T/U, C-G) or a
-   * wobble (G-T/U) pair (either way round), else false
+   * Answers true if the base-pair is either a Watson-Crick (A:T/U, C:G) or a
+   * wobble (G:T/U) pair (either way round), else false
    * 
    * @param first
    * @param second
@@ -376,7 +376,7 @@ public class Rna
     {
       second -= 32;
     }
-  
+
     switch (first)
     {
     case 'A':
@@ -416,6 +416,14 @@ public class Rna
     return false;
   }
 
+  /**
+   * Answers true if the base-pair is Watson-Crick - (A:T/U or C:G, either way
+   * round), else false
+   * 
+   * @param first
+   * @param second
+   * @return
+   */
   public static boolean isCanonicalPair(char first, char second)
   {