X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2Fscoremodels%2FFeatureDistanceModel.java;h=bcc085558a4beb19f18b3fe68ec95de58ad83177;hb=6ca8a32d88328b8f2162512f41c657c87e131045;hp=bfecd65c074f37de1847da2d594aafb5e7d1c2ec;hpb=3740241b6d0dfa109dc81847afe58f17497c39e8;p=jalview.git

diff --git a/src/jalview/analysis/scoremodels/FeatureDistanceModel.java b/src/jalview/analysis/scoremodels/FeatureDistanceModel.java
index bfecd65..bcc0855 100644
--- a/src/jalview/analysis/scoremodels/FeatureDistanceModel.java
+++ b/src/jalview/analysis/scoremodels/FeatureDistanceModel.java
@@ -58,14 +58,17 @@ public class FeatureDistanceModel extends DistanceScoreModel
     FeatureDistanceModel instance;
     try
     {
-      instance = this.getClass().newInstance();
+      instance = this.getClass().getDeclaredConstructor().newInstance();
       instance.configureFromAlignmentView(view);
       return instance;
     } catch (InstantiationException | IllegalAccessException e)
     {
-      System.err.println("Error in " + getClass().getName()
+      jalview.bin.Console.errPrintln("Error in " + getClass().getName()
               + ".getInstance(): " + e.getMessage());
       return null;
+    } catch (ReflectiveOperationException roe)
+    {
+      return null;
     }
   }
 
@@ -198,8 +201,8 @@ public class FeatureDistanceModel extends DistanceScoreModel
          * position is not a gap
          */
         Set<String> types = new HashSet<>();
-        List<SequenceFeature> sfs = fr.findFeaturesAtResidue(
-                seq.getRefSeq(), spos, spos);
+        List<SequenceFeature> sfs = fr
+                .findFeaturesAtResidue(seq.getRefSeq(), spos, spos);
         for (SequenceFeature sf : sfs)
         {
           types.add(sf.getType());