X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2Fscoremodels%2FPIDModel.java;h=721ba456f26198755bd8021ebe81d7a4388ba99e;hb=c70905eb5589c7622a2c7cf8a008ba0863b5c010;hp=985918bdfb3e3dd4af56b82bd5f5b81f1583ea46;hpb=e5c87d2dd1d3ebceea890ef92c8a6374c62d3c83;p=jalview.git diff --git a/src/jalview/analysis/scoremodels/PIDModel.java b/src/jalview/analysis/scoremodels/PIDModel.java index 985918b..721ba45 100644 --- a/src/jalview/analysis/scoremodels/PIDModel.java +++ b/src/jalview/analysis/scoremodels/PIDModel.java @@ -1,6 +1,8 @@ package jalview.analysis.scoremodels; +import jalview.api.AlignmentViewPanel; import jalview.api.analysis.PairwiseScoreModelI; +import jalview.api.analysis.ScoreModelI; import jalview.api.analysis.SimilarityParamsI; import jalview.datamodel.AlignmentView; import jalview.math.Matrix; @@ -9,7 +11,8 @@ import jalview.util.Comparison; /** * A class to provide sequence pairwise similarity based on residue identity. - * Instances of this class are immutable and thread-safe. + * Instances of this class are immutable and thread-safe, so the same object is + * returned from calls to getInstance(). */ public class PIDModel extends SimilarityScoreModel implements PairwiseScoreModelI @@ -231,4 +234,10 @@ public class PIDModel extends SimilarityScoreModel implements return divideBy == 0 ? 0D : 100D * total / divideBy; } + + @Override + public ScoreModelI getInstance(AlignmentViewPanel avp) + { + return this; + } }