X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FAlignViewControllerGuiI.java;h=86e61e7fc51d3331231c354eac53cd8ada8fd9da;hb=37de9310bec3501cbc6381e0c3dcb282fcaad812;hp=584f596f4ddeec26d9c9e6af140cb0b2f02aa842;hpb=70f9c4700f20a8fa57ed7eb974277d8bad0723c2;p=jalview.git

diff --git a/src/jalview/api/AlignViewControllerGuiI.java b/src/jalview/api/AlignViewControllerGuiI.java
index 584f596..86e61e7 100644
--- a/src/jalview/api/AlignViewControllerGuiI.java
+++ b/src/jalview/api/AlignViewControllerGuiI.java
@@ -21,6 +21,7 @@
 package jalview.api;
 
 import jalview.commands.CommandI;
+import jalview.schemes.ColourSchemeI;
 
 /**
  * Interface implemented by gui implementations managing a Jalview Alignment
@@ -41,4 +42,24 @@ public interface AlignViewControllerGuiI
 
   void addHistoryItem(CommandI command);
 
+  void setShowSeqFeatures(boolean show);
+
+  void setMenusForViewport();
+
+  void changeColour(ColourSchemeI cs);
+
+  /**
+   * trigger an update of the UI in response to a model data change, and if
+   * necessary enable the display of sequence feature annotation on the view.
+   * 
+   * @param enableIfNecessary
+   */
+  void refreshFeatureUI(boolean enableIfNecessary);
+
+  /**
+   * get the Feature Settings control panel for the alignment view if one exists
+   * 
+   * @return
+   */
+  FeatureSettingsControllerI getFeatureSettingsUI();
 }