X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FAlignViewControllerGuiI.java;h=86e61e7fc51d3331231c354eac53cd8ada8fd9da;hb=a3af95d79b82dad26b033d8bae458d4bffe9a95c;hp=b08a0aa7a0acda9ee7ae75b0ec980e2df6f5f5b6;hpb=4660fcf0745dbc1f6f6e7241b398301f93edb548;p=jalview.git

diff --git a/src/jalview/api/AlignViewControllerGuiI.java b/src/jalview/api/AlignViewControllerGuiI.java
index b08a0aa..86e61e7 100644
--- a/src/jalview/api/AlignViewControllerGuiI.java
+++ b/src/jalview/api/AlignViewControllerGuiI.java
@@ -20,8 +20,6 @@
  */
 package jalview.api;
 
-import java.util.List;
-
 import jalview.commands.CommandI;
 import jalview.schemes.ColourSchemeI;
 
@@ -45,12 +43,23 @@ public interface AlignViewControllerGuiI
   void addHistoryItem(CommandI command);
 
   void setShowSeqFeatures(boolean show);
-  
+
   void setMenusForViewport();
-  
+
   void changeColour(ColourSchemeI cs);
 
-  void hideColumns(List<int[]> colsToHide);
+  /**
+   * trigger an update of the UI in response to a model data change, and if
+   * necessary enable the display of sequence feature annotation on the view.
+   * 
+   * @param enableIfNecessary
+   */
+  void refreshFeatureUI(boolean enableIfNecessary);
 
-  void syncHiddenSequences();
+  /**
+   * get the Feature Settings control panel for the alignment view if one exists
+   * 
+   * @return
+   */
+  FeatureSettingsControllerI getFeatureSettingsUI();
 }