X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FAlignViewportI.java;h=2870373a84208c58589f9a8d175dbadcf5c02e00;hb=09cce494f72431183bd3c37e77913170a08c3ac3;hp=9e6d1c05b955f2d895be047a313e755168f23121;hpb=bfd6896b97d4ec5c58d7c52079220ff75437c9a9;p=jalview.git diff --git a/src/jalview/api/AlignViewportI.java b/src/jalview/api/AlignViewportI.java index 9e6d1c0..2870373 100644 --- a/src/jalview/api/AlignViewportI.java +++ b/src/jalview/api/AlignViewportI.java @@ -26,6 +26,7 @@ import jalview.datamodel.AlignmentI; import jalview.datamodel.AlignmentView; import jalview.datamodel.CigarArray; import jalview.datamodel.ColumnSelection; +import jalview.datamodel.ContactListI; import jalview.datamodel.ProfilesI; import jalview.datamodel.SearchResultsI; import jalview.datamodel.SequenceCollectionI; @@ -472,6 +473,8 @@ public interface AlignViewportI extends ViewStyleI */ SearchResultsI getSearchResults(); + ContactListI getContactList(AlignmentAnnotation _aa, int column); + /** * Updates view settings with the given font. You may need to call * AlignmentPanel.fontChanged to update the layout geometry. @@ -486,6 +489,7 @@ public interface AlignViewportI extends ViewStyleI * * @return */ + @Override boolean isProteinFontAsCdna(); /** @@ -493,5 +497,6 @@ public interface AlignViewportI extends ViewStyleI * * @return */ + @Override void setProteinFontAsCdna(boolean b); }