X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FAlignViewportI.java;h=ab9efb164a835304991570aeb22ba87ded8b8121;hb=d7c00f48b00e3ede57c46ae4daf6a9203b9b6059;hp=6688e2704ab71bb970ae90f825a08f8c01cb0776;hpb=56304e6a5df26368b08a42423919ed315ba3fffb;p=jalview.git

diff --git a/src/jalview/api/AlignViewportI.java b/src/jalview/api/AlignViewportI.java
index 6688e27..ab9efb1 100644
--- a/src/jalview/api/AlignViewportI.java
+++ b/src/jalview/api/AlignViewportI.java
@@ -4,10 +4,14 @@
 package jalview.api;
 
 import java.util.Hashtable;
+import java.util.Map;
 
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AlignmentI;
+import jalview.datamodel.AnnotatedCollectionI;
 import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.SequenceCollectionI;
+import jalview.datamodel.SequenceI;
 import jalview.schemes.ColourSchemeI;
 import jalview.schemes.RNAHelicesColour;
 
@@ -100,4 +104,9 @@ public interface AlignViewportI
    */
   void setGlobalColourScheme(ColourSchemeI rhc);
 
+  Map<SequenceI, SequenceCollectionI> getHiddenRepSequences();
+
+  void setHiddenRepSequences(
+          Map<SequenceI, SequenceCollectionI> hiddenRepSequences);
+
 }