X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FAlignmentViewPanel.java;h=9593a5b7aa2019e0c9c32be3dac2900e0372def9;hb=4b2392caa53f1de3400e7916d1d9c7b815d446f4;hp=f0fd2e1a649577f97e6846a1433e0dff08952fe9;hpb=be32c14cd8e48fe0a207cd7030cb9cd46f894678;p=jalview.git

diff --git a/src/jalview/api/AlignmentViewPanel.java b/src/jalview/api/AlignmentViewPanel.java
index f0fd2e1..9593a5b 100644
--- a/src/jalview/api/AlignmentViewPanel.java
+++ b/src/jalview/api/AlignmentViewPanel.java
@@ -23,6 +23,8 @@ package jalview.api;
 import jalview.datamodel.AlignmentI;
 import jalview.structure.StructureSelectionManager;
 
+import java.awt.image.BufferedImage;
+
 /**
  * abstract interface implemented by alignment panels holding an alignment view
  * 
@@ -43,9 +45,10 @@ public interface AlignmentViewPanel extends OOMHandlerI
    * 
    * @param updateOverview
    *          - if true, the overview panel will also be updated and repainted
+   * @param updateStructures
+   *          - if true then any linked structure views will also be updated
    */
-
-  void paintAlignment(boolean updateOverview);
+  void paintAlignment(boolean updateOverview, boolean updateStructures);
 
   /**
    * automatically adjust annotation panel height for new annotation whilst
@@ -56,10 +59,15 @@ public interface AlignmentViewPanel extends OOMHandlerI
   FeatureRenderer getFeatureRenderer();
 
   FeatureRenderer cloneFeatureRenderer();
-  
+
   /**
    * 
    * @return displayed name for the view
    */
   String getViewName();
+
+  SequenceRenderer getSequenceRenderer();
+
+  void overviewDone(BufferedImage miniMe);
+
 }