X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FComplexAlignFile.java;h=1b579adc519f810b90dcfb33bf3b94b5cbf14edf;hb=3d3cc73c14a48c9af73bf0a33a4897b37a66856b;hp=4ac08cf8b6974884327e77235f9dc4c9aec838de;hpb=db4eacee27b836db4126dca551887bfc6652d72a;p=jalview.git

diff --git a/src/jalview/api/ComplexAlignFile.java b/src/jalview/api/ComplexAlignFile.java
index 4ac08cf..1b579ad 100644
--- a/src/jalview/api/ComplexAlignFile.java
+++ b/src/jalview/api/ComplexAlignFile.java
@@ -20,9 +20,8 @@
  */
 package jalview.api;
 
-import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.HiddenColumns;
 import jalview.datamodel.SequenceI;
-import jalview.schemes.ColourSchemeI;
 
 /**
  * This interface should be implemented by complex file parser with the ability
@@ -44,14 +43,14 @@ public interface ComplexAlignFile
    * 
    * @return
    */
-  public ColourSchemeI getColourScheme();
+  public String getGlobalColourScheme();
 
   /**
    * Retrieves the Column selection/hidden column from a complex file parser
    * 
    * @return
    */
-  public ColumnSelection getColumnSelection();
+  public HiddenColumns getHiddenColumns();
 
   /**
    * Retrieves hidden sequences from a complex file parser