X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FFeatureRenderer.java;h=79911d9cd8063ed10ec4cf19f91df8879b02895e;hb=8647c805617f33b905c4f72ebe30aab3c21b56f4;hp=a0552dc4839b2ffbbc8ae41d9fa32b5c5ad7b41a;hpb=e1cd94839128776e14e51ded3f3be2dcc7e72273;p=jalview.git

diff --git a/src/jalview/api/FeatureRenderer.java b/src/jalview/api/FeatureRenderer.java
index a0552dc..79911d9 100644
--- a/src/jalview/api/FeatureRenderer.java
+++ b/src/jalview/api/FeatureRenderer.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -22,9 +22,11 @@ package jalview.api;
 
 import jalview.datamodel.SequenceFeature;
 import jalview.datamodel.SequenceI;
-import jalview.schemes.GraduatedColor;
 
 import java.awt.Color;
+import java.util.Hashtable;
+import java.util.List;
+import java.util.Map;
 
 /**
  * Abstract feature renderer interface
@@ -43,4 +45,34 @@ public interface FeatureRenderer
 
   void setColour(String ft, Object ggc);
 
+  AlignViewportI getViewport();
+
+  FeaturesDisplayedI getFeaturesDisplayed();
+
+  Map<String,Object> getFeatureColours();
+
+  void findAllFeatures(boolean newMadeVisible);
+
+  Map<String,Object> getDisplayedFeatureCols();
+
+  List<String> getFeatureGroups();
+
+  List<String> getGroups(boolean visible);
+
+  void setGroupVisibility(List<String> toset, boolean visible);
+
+  void setGroupVisibility(String group, boolean visible);
+
+  List<SequenceFeature> findFeaturesAtRes(SequenceI sequence, int res);
+
+  boolean isTransparencyAvailable();
+
+  String[] getDisplayedFeatureTypes();
+
+  String[] getDisplayedFeatureGroups();
+
+  void setAllVisible(List<String> featureTypes);
+
+  void setVisible(String featureType);
+
 }