X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FFeatureRenderer.java;h=79911d9cd8063ed10ec4cf19f91df8879b02895e;hb=fe72160257543fca39f7959fc1347665e95764a2;hp=ea7f55a515284d787c96375374cd93e0562a2231;hpb=865a855a4ca87eadb3e5ff284ed32ed307d9c34b;p=jalview.git

diff --git a/src/jalview/api/FeatureRenderer.java b/src/jalview/api/FeatureRenderer.java
index ea7f55a..79911d9 100644
--- a/src/jalview/api/FeatureRenderer.java
+++ b/src/jalview/api/FeatureRenderer.java
@@ -1,26 +1,32 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.api;
 
+import jalview.datamodel.SequenceFeature;
 import jalview.datamodel.SequenceI;
 
 import java.awt.Color;
+import java.util.Hashtable;
+import java.util.List;
+import java.util.Map;
 
 /**
  * Abstract feature renderer interface
@@ -35,4 +41,38 @@ public interface FeatureRenderer
 
   void featuresAdded();
 
+  Object getFeatureStyle(String ft);
+
+  void setColour(String ft, Object ggc);
+
+  AlignViewportI getViewport();
+
+  FeaturesDisplayedI getFeaturesDisplayed();
+
+  Map<String,Object> getFeatureColours();
+
+  void findAllFeatures(boolean newMadeVisible);
+
+  Map<String,Object> getDisplayedFeatureCols();
+
+  List<String> getFeatureGroups();
+
+  List<String> getGroups(boolean visible);
+
+  void setGroupVisibility(List<String> toset, boolean visible);
+
+  void setGroupVisibility(String group, boolean visible);
+
+  List<SequenceFeature> findFeaturesAtRes(SequenceI sequence, int res);
+
+  boolean isTransparencyAvailable();
+
+  String[] getDisplayedFeatureTypes();
+
+  String[] getDisplayedFeatureGroups();
+
+  void setAllVisible(List<String> featureTypes);
+
+  void setVisible(String featureType);
+
 }