X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FSequenceStructureBinding.java;h=cbdbbe07f6a1c308745bd83c8c38f503a75386c0;hb=838e4f91d4a53dd315640dbc9ff6ef7a815ee576;hp=99be87a920b5e9fba4c409915bac4f2eb4a423a8;hpb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;p=jalview.git

diff --git a/src/jalview/api/SequenceStructureBinding.java b/src/jalview/api/SequenceStructureBinding.java
index 99be87a..cbdbbe0 100644
--- a/src/jalview/api/SequenceStructureBinding.java
+++ b/src/jalview/api/SequenceStructureBinding.java
@@ -1,19 +1,21 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.api;
@@ -27,6 +29,23 @@ package jalview.api;
 public interface SequenceStructureBinding
 {
 
-  // todo: decide what this really means - we could return a reference to the
-  // alignment/jmol binding, or some other binding.
+  /**
+   * 
+   * @return true if Jalview or the Viewer is still restoring state or loading
+   *         is still going on (see setFinishedLoadingFromArchive)
+   */
+  void setLoadingFromArchive(boolean loadingFromArchive);
+
+  boolean isLoadingFromArchive();
+
+  /**
+   * modify flag which controls if sequence colouring events are honoured by the
+   * binding. Should be true for normal operation
+   * 
+   * @param finishedLoading
+   */
+  void setFinishedLoadingFromArchive(boolean finishedLoading);
+
+  boolean isLoadingFinished();
+
 }