X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fapi%2FSiftsClientI.java;h=367a0decee70763bc7e3919de09aca8b20177d35;hb=4f30214e8098748469c6a4269ac2ed6c5750e4b0;hp=dad434ac9f16c097c84019b53656247552a576bb;hpb=37bc56d23032f26c0da11b0532902d1f629a2080;p=jalview.git diff --git a/src/jalview/api/SiftsClientI.java b/src/jalview/api/SiftsClientI.java index dad434a..367a0de 100644 --- a/src/jalview/api/SiftsClientI.java +++ b/src/jalview/api/SiftsClientI.java @@ -47,7 +47,6 @@ public interface SiftsClientI */ public String getDbCoordSys(); - /** * Get DB Source for the SIFTs Entry * @@ -101,7 +100,7 @@ public interface SiftsClientI * @return Sequence<->Structure mapping as int[][] * @throws SiftsException */ - public StringBuffer getMappingOutput(MappingOutputPojo mop) + public StringBuilder getMappingOutput(MappingOutputPojo mop) throws SiftsException; /** @@ -117,7 +116,7 @@ public interface SiftsClientI */ public StructureMapping getSiftsStructureMapping(SequenceI seq, String pdbFile, String chain) throws SiftsException; - + /** * Get residue by residue mapping for a given Sequence and SIFTs entity * @@ -129,6 +128,5 @@ public interface SiftsClientI * @throws Exception */ public HashMap getGreedyMapping(String entityId, - SequenceI seq, - java.io.PrintStream os) throws SiftsException; + SequenceI seq, java.io.PrintStream os) throws SiftsException; } \ No newline at end of file