X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignFrame.java;h=062dbf8256d3d233be0fe82c88454e9fbaed9b9a;hb=1cec732f963ab102c9d8381203df8c8cba2a9ee4;hp=adfb8ca90abfb7530edf1a3a19b15a3510da2aa2;hpb=26ee59562604fa9164e895e3ca07e11398a6c8a0;p=jalview.git

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index adfb8ca..062dbf8 100644
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -882,7 +882,7 @@ public class AlignFrame extends EmbmenuFrame implements AlignFrameI,
     }
     else if (source == autoCalculate)
     {
-      viewport.autoCalculateConsensus = autoCalculate.getState();
+      viewport.setAutoCalculateConsensusAndConservation(autoCalculate.getState());
     }
     else if (source == sortByTree)
     {