X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignFrame.java;h=221f793d9c83fe1ad7d492c3fa9c404b8c6a5978;hb=cee29c9fa89ed1d1df7b3af9f97055d8cd6eb77e;hp=6a0b39015e3f4a6c2197423e77c47e92b22aec4d;hpb=4b2be7cd8c14e67cc347609199e25c7f09fda988;p=jalview.git diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java index 6a0b390..221f793 100644 --- a/src/jalview/appletgui/AlignFrame.java +++ b/src/jalview/appletgui/AlignFrame.java @@ -22,6 +22,7 @@ package jalview.appletgui; import jalview.analysis.AlignmentSorter; import jalview.analysis.AnnotationSorter.SequenceAnnotationOrder; +import jalview.analysis.NJTree; import jalview.api.AlignViewControllerGuiI; import jalview.api.AlignViewControllerI; import jalview.api.AlignViewportI; @@ -2805,22 +2806,26 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener, public void averageDistanceTreeMenuItem_actionPerformed() { - NewTreePanel("AV", "PID", "Average distance tree using PID"); + NewTreePanel(NJTree.AVERAGE_DISTANCE, "PID", + "Average distance tree using PID"); } public void neighbourTreeMenuItem_actionPerformed() { - NewTreePanel("NJ", "PID", "Neighbour joining tree using PID"); + NewTreePanel(NJTree.NEIGHBOUR_JOINING, "PID", + "Neighbour joining tree using PID"); } protected void njTreeBlosumMenuItem_actionPerformed() { - NewTreePanel("NJ", "BL", "Neighbour joining tree using BLOSUM62"); + NewTreePanel(NJTree.NEIGHBOUR_JOINING, "BL", + "Neighbour joining tree using BLOSUM62"); } protected void avTreeBlosumMenuItem_actionPerformed() { - NewTreePanel("AV", "BL", "Average distance tree using BLOSUM62"); + NewTreePanel(NJTree.AVERAGE_DISTANCE, "BL", + "Average distance tree using BLOSUM62"); } void NewTreePanel(String type, String pwType, String title)