X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignFrame.java;h=bad238385d3675313fa521bfbe3dbe0da28000ea;hb=3da878124135ff033f42d19d8733891b09e953cd;hp=8740f51cdf1748ea5d59ac5906d4269218eed304;hpb=b879c4a2d32d3489e63ac06917e81637e6bb4068;p=jalview.git

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 8740f51..bad2383 100644
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -416,7 +416,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
         viewport.featureSettings.refreshTable();
       }
       alignPanel.paintAlignment(true, true);
-      statusBar.setText(MessageManager
+      setStatus(MessageManager
               .getString("label.successfully_added_features_alignment"));
     }
     return featuresFile;
@@ -574,7 +574,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
 
     case KeyEvent.VK_F2:
       viewport.cursorMode = !viewport.cursorMode;
-      statusBar.setText(MessageManager
+      setStatus(MessageManager
               .formatMessage("label.keyboard_editing_mode", new String[]
               { (viewport.cursorMode ? "on" : "off") }));
       if (viewport.cursorMode)
@@ -1447,14 +1447,12 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
     {
       features = formatter.printJalviewFormat(
               viewport.getAlignment().getSequencesArray(),
-              getDisplayedFeatureCols(), null, getDisplayedFeatureGroups(),
-              true);
+              alignPanel.getFeatureRenderer(), true);
     }
     else
     {
       features = formatter.printGffFormat(viewport.getAlignment()
-              .getSequencesArray(), getDisplayedFeatureCols(),
-              getDisplayedFeatureGroups(), true);
+              .getSequencesArray(), alignPanel.getFeatureRenderer(), true);
     }
 
     if (displayTextbox)
@@ -2349,7 +2347,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
                 column, al);
       }
 
-      statusBar.setText(MessageManager
+      setStatus(MessageManager
               .formatMessage("label.removed_columns", new String[]
               { Integer.valueOf(trimRegion.getSize()).toString() }));
       addHistoryItem(trimRegion);
@@ -2393,7 +2391,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
 
     addHistoryItem(removeGapCols);
 
-    statusBar.setText(MessageManager
+    setStatus(MessageManager
             .formatMessage("label.removed_empty_columns", new String[]
             { Integer.valueOf(removeGapCols.getSize()).toString() }));
 
@@ -3815,7 +3813,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
      */
     statusBar.setBackground(Color.white);
     statusBar.setFont(new java.awt.Font("Verdana", 0, 11));
-    statusBar.setText(MessageManager.getString("label.status_bar"));
+    setStatus(MessageManager.getString("label.status_bar"));
     this.add(statusBar, BorderLayout.SOUTH);
   }