X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignFrame.java;h=eaf93c274e5b671092d515cf2dd101cc1a6b3ea7;hb=4a7adcc9f6c0d05e12f8ea5460b0c9372020b98a;hp=305123094e70c583895271223a0912b5da60b63e;hpb=1b2a573d7c93db57c3299d768f021c9096dffc67;p=jalview.git

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 3051230..eaf93c2 100644
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -927,7 +927,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
               : showForSequences);
         aa.visible = visible;
     }
-    alignPanel.validateAnnotationDimensions(false);
+    alignPanel.validateAnnotationDimensions(true);
   }
 
   private void setAnnotationSortOrder(SequenceAnnotationOrder order)
@@ -1340,7 +1340,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
             { e.getActionCommand() }), 600, 500);
 
     FeatureRenderer fr = this.alignPanel.cloneFeatureRenderer();
-    cap.setText(new AppletFormatAdapter(viewport).formatSequences(
+    cap.setText(new AppletFormatAdapter(alignPanel).formatSequences(
             e.getActionCommand(), viewport.getAlignment(),
             viewport.getShowJVSuffix()));
   }