X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignViewport.java;h=2bead4674fc27e795f0c6d832620bb1eb844dd0d;hb=4b2392caa53f1de3400e7916d1d9c7b815d446f4;hp=900445751a425e9fb0bca0d64c70aee6f2a0f121;hpb=26c6c742815123a3985d9f9fa77372d439ef9263;p=jalview.git diff --git a/src/jalview/appletgui/AlignViewport.java b/src/jalview/appletgui/AlignViewport.java index 9004457..2bead46 100644 --- a/src/jalview/appletgui/AlignViewport.java +++ b/src/jalview/appletgui/AlignViewport.java @@ -25,14 +25,11 @@ import jalview.api.FeatureSettingsModelI; import jalview.bin.JalviewLite; import jalview.commands.CommandI; import jalview.datamodel.AlignmentI; -import jalview.datamodel.Annotation; import jalview.datamodel.ColumnSelection; import jalview.datamodel.HiddenColumns; import jalview.datamodel.SearchResults; import jalview.datamodel.SearchResultsI; -import jalview.datamodel.Sequence; import jalview.datamodel.SequenceGroup; -import jalview.datamodel.SequenceI; import jalview.renderer.ResidueShader; import jalview.schemes.ColourSchemeProperty; import jalview.schemes.UserColourScheme; @@ -196,7 +193,8 @@ public class AlignViewport extends AlignmentViewport if (colour != null) { residueShading = new ResidueShader( - ColourSchemeProperty.getColourScheme(alignment, colour)); + ColourSchemeProperty.getColourScheme(this, alignment, + colour)); if (residueShading != null) { residueShading.setConsensus(hconsensus); @@ -255,7 +253,7 @@ public class AlignViewport extends AlignmentViewport public void resetSeqLimits(int height) { - ranges.setEndSeq(height / getCharHeight()); + ranges.setEndSeq(height / getCharHeight() - 1); // BH 2019.04.18 } boolean centreColumnLabels;