X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignViewport.java;h=382fcb6e8b2809568156463ab847531f5ba954ca;hb=08044f16da407871ea84ccbfbc09e34cceb74080;hp=30724a4e8ec3e2461eeb70399a7bb47b0ecdd405;hpb=92f934a3ed429a46227cf829f985d72cb7e86fb7;p=jalview.git

diff --git a/src/jalview/appletgui/AlignViewport.java b/src/jalview/appletgui/AlignViewport.java
index 30724a4..382fcb6 100755
--- a/src/jalview/appletgui/AlignViewport.java
+++ b/src/jalview/appletgui/AlignViewport.java
@@ -36,7 +36,8 @@ public class AlignViewport
   int startSeq;
   int endSeq;
 
-  boolean showFullId = true;
+  boolean showDBPrefix = true;
+  boolean showJVSuffix = true;
   boolean showText = true;
   boolean showColourText = false;
   boolean showBoxes = true;
@@ -57,8 +58,7 @@ public class AlignViewport
 
   int charHeight;
   int charWidth;
-  int chunkWidth;
-  int chunkHeight;
+  int wrappedWidth;
 
   Font font = new Font("SansSerif", Font.PLAIN, 10);
   AlignmentI alignment;
@@ -99,7 +99,7 @@ public class AlignViewport
       String param = applet.getParameter("showFullId");
       if (param != null)
       {
-        showFullId = Boolean.valueOf(param).booleanValue();
+        showJVSuffix = Boolean.valueOf(param).booleanValue();
       }
 
       param = applet.getParameter("showAnnotation");
@@ -443,24 +443,14 @@ public class AlignViewport
     return charHeight;
   }
 
-  public void setChunkWidth(int w)
+  public void setWrappedWidth(int w)
   {
-    this.chunkWidth = w;
+    this.wrappedWidth = w;
   }
 
-  public int getChunkWidth()
+  public int getwrappedWidth()
   {
-    return chunkWidth;
-  }
-
-  public void setChunkHeight(int h)
-  {
-    this.chunkHeight = h;
-  }
-
-  public int getChunkHeight()
-  {
-    return chunkHeight;
+    return wrappedWidth;
   }
 
   public AlignmentI getAlignment()
@@ -607,14 +597,24 @@ public class AlignViewport
     return colourAppliesToAllGroups;
   }
 
-  public boolean getShowFullId()
+  public boolean getShowJVSuffix()
+  {
+    return showJVSuffix;
+  }
+
+  public void setShowJVSuffix(boolean b)
+  {
+    showJVSuffix = b;
+  }
+
+  public boolean getShowDBPrefix()
   {
-    return showFullId;
+    return showDBPrefix;
   }
 
-  public void setShowFullId(boolean b)
+  public void setShowDBPrefix(boolean b)
   {
-    showFullId = b;
+    showDBPrefix = b;
   }
 
   public boolean getShowAnnotation()