X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAnnotationLabels.java;h=07c3e0af34527769886e942e9adf08384d1c4e9b;hb=b5667f39acdf309cd92881b73edfda591e0acaf4;hp=bbcb3b80c0c130390a38daf8cf25ce06d9f40f4b;hpb=aad3640b07f836362df7ea025fa09127a0a06145;p=jalview.git

diff --git a/src/jalview/appletgui/AnnotationLabels.java b/src/jalview/appletgui/AnnotationLabels.java
index bbcb3b8..07c3e0a 100755
--- a/src/jalview/appletgui/AnnotationLabels.java
+++ b/src/jalview/appletgui/AnnotationLabels.java
@@ -202,7 +202,9 @@ public class AnnotationLabels extends Panel
     }
     else if (evt.getActionCommand().equals(COPYCONS_SEQ))
     {
-      SequenceI cons = av.getConsensusSeq();
+      SequenceGroup group = aa[selectedRow].groupRef;
+      SequenceI cons = group == null ? av.getConsensusSeq()
+              : group.getConsensusSeq();
       if (cons != null)
       {
         copy_annotseqtoclipboard(cons);
@@ -455,8 +457,8 @@ public class AnnotationLabels extends Panel
             .getAlignmentAnnotation();
 
     // DETECT RIGHT MOUSE BUTTON IN AWT
-    if ((evt.getModifiers()
-            & InputEvent.BUTTON3_MASK) == InputEvent.BUTTON3_MASK)
+    if ((evt.getModifiersEx()
+            & InputEvent.BUTTON3_DOWN_MASK) == InputEvent.BUTTON3_DOWN_MASK)
     {
 
       PopupMenu popup = new PopupMenu(
@@ -532,7 +534,7 @@ public class AnnotationLabels extends Panel
                     MessageManager.getString("label.ignore_gaps_consensus"),
                     (aa[selectedRow].groupRef != null)
                             ? aa[selectedRow].groupRef
-                                    .getIgnoreGapsConsensus()
+                                    .isIgnoreGapsConsensus()
                             : ap.av.isIgnoreGapsConsensus());
             final AlignmentAnnotation aaa = aa[selectedRow];
             cbmi.addItemListener(new ItemListener()