X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAppletJmol.java;h=c0b4ff0dc5cf9d991877c652f2f07f31d1496fd9;hb=5f3cd06105c207686e3637f40a04146076a73c87;hp=9d4779cd8db8eabaa541ef47f19c2025af3de5c2;hpb=7d67fb613ec026dc9a265e351e7fab542e3f1d61;p=jalview.git diff --git a/src/jalview/appletgui/AppletJmol.java b/src/jalview/appletgui/AppletJmol.java index 9d4779c..c0b4ff0 100644 --- a/src/jalview/appletgui/AppletJmol.java +++ b/src/jalview/appletgui/AppletJmol.java @@ -24,8 +24,8 @@ import jalview.bin.JalviewLite; import jalview.datamodel.AlignmentI; import jalview.datamodel.PDBEntry; import jalview.datamodel.SequenceI; -import jalview.io.FileParse; import jalview.io.DataSourceType; +import jalview.io.FileParse; import jalview.io.StructureFile; import jalview.schemes.BuriedColourScheme; import jalview.schemes.HelixColourScheme; @@ -93,27 +93,29 @@ public class AppletJmol extends EmbmenuFrame implements MenuItem charge = new MenuItem( MessageManager.getString("label.charge_cysteine")); - MenuItem zappo = new MenuItem(MessageManager.getString("label.zappo")); + MenuItem zappo = new MenuItem( + MessageManager.getString("label.colourScheme_zappo")); - MenuItem taylor = new MenuItem(MessageManager.getString("label.taylor")); + MenuItem taylor = new MenuItem( + MessageManager.getString("label.colourScheme_taylor")); MenuItem hydro = new MenuItem( - MessageManager.getString("label.hydrophobicity")); + MessageManager.getString("label.colourScheme_hydrophobic")); MenuItem helix = new MenuItem( - MessageManager.getString("label.helix_propensity")); + MessageManager.getString("label.colourScheme_helix_propensity")); MenuItem strand = new MenuItem( - MessageManager.getString("label.strand_propensity")); + MessageManager.getString("label.colourScheme_strand_propensity")); MenuItem turn = new MenuItem( - MessageManager.getString("label.turn_propensity")); + MessageManager.getString("label.colourScheme_turn_propensity")); MenuItem buried = new MenuItem( - MessageManager.getString("label.buried_index")); + MessageManager.getString("label.colourScheme_buried_index")); MenuItem purinepyrimidine = new MenuItem( - MessageManager.getString("label.purine_pyrimidine")); + MessageManager.getString("label.colourScheme_purine/pyrimidine")); MenuItem user = new MenuItem( MessageManager.getString("label.user_defined_colours")); @@ -584,7 +586,7 @@ public class AppletJmol extends EmbmenuFrame implements public void updateTitleAndMenus() { - if (jmb.fileLoadingError != null && jmb.fileLoadingError.length() > 0) + if (jmb.hasFileLoadingError()) { repaint(); return;