X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAppletJmol.java;h=d894a47a4c1d7e296e6c83399aee4b0051e86340;hb=c19d2a91ca05e052e3408bf5852d88eb5d0608f1;hp=03796150a4e762fc35be7ad69a6b081938bc185e;hpb=46b0a2d1b462cbf1f910d9bab22e4326ab6562e0;p=jalview.git diff --git a/src/jalview/appletgui/AppletJmol.java b/src/jalview/appletgui/AppletJmol.java index 0379615..d894a47 100644 --- a/src/jalview/appletgui/AppletJmol.java +++ b/src/jalview/appletgui/AppletJmol.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) - * Copyright (C) $$Year-Rel$$ The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * @@ -179,10 +179,8 @@ public class AppletJmol extends EmbmenuFrame implements { this.ap = ap; jmb = new AppletJmolBinding(this, ap.getStructureSelectionManager(), - new PDBEntry[] - { pdbentry }, new SequenceI[][] - { seq }, new String[][] - { chains }, protocol); + new PDBEntry[] { pdbentry }, new SequenceI[][] { seq }, + new String[][] { chains }, protocol); jmb.setColourBySequence(true); if (pdbentry.getId() == null || pdbentry.getId().length() < 1) { @@ -347,7 +345,9 @@ public class AppletJmol extends EmbmenuFrame implements } if (freader == null) { - throw new Exception(MessageManager.getString("exception.invalid_datasource_couldnt_obtain_reader")); + throw new Exception( + MessageManager + .getString("exception.invalid_datasource_couldnt_obtain_reader")); } jmb.viewer.openReader(pdbentry.getFile(), pdbentry.getId(), freader);