X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAppletJmolBinding.java;h=c7ce9945777ec67adcb2a65626a35ac414687515;hb=ae3fad8019274ca3ab1258a480ba15dd9adac1e9;hp=9b8a235b27d2d752a5739d77519e455e13f54b90;hpb=376dcacfd60997d37d4507bb31fab158d23bbf7d;p=jalview.git

diff --git a/src/jalview/appletgui/AppletJmolBinding.java b/src/jalview/appletgui/AppletJmolBinding.java
index 9b8a235..c7ce994 100644
--- a/src/jalview/appletgui/AppletJmolBinding.java
+++ b/src/jalview/appletgui/AppletJmolBinding.java
@@ -32,7 +32,7 @@ import java.util.Map;
 
 import org.jmol.api.JmolAppConsoleInterface;
 import org.jmol.console.AppletConsole;
-import org.jmol.java.BS;
+import javajs.util.BS;
 
 class AppletJmolBinding extends JalviewJmolBinding
 {
@@ -51,13 +51,6 @@ class AppletJmolBinding extends JalviewJmolBinding
   }
 
   @Override
-  public jalview.api.FeatureRenderer getFeatureRenderer(
-          AlignmentViewPanel alignment)
-  {
-    return appletJmolBinding.ap.getFeatureRenderer();
-  }
-
-  @Override
   public jalview.api.SequenceRenderer getSequenceRenderer(
           AlignmentViewPanel alignment)
   {
@@ -110,8 +103,8 @@ class AppletJmolBinding extends JalviewJmolBinding
   {
     try
     {
-      appletJmolBinding.ap.av.applet.getAppletContext().showDocument(
-              new java.net.URL(url), "jmol");
+      appletJmolBinding.ap.av.applet.getAppletContext()
+              .showDocument(new java.net.URL(url), "jmol");
     } catch (java.net.MalformedURLException ex)
     {
     }
@@ -154,7 +147,7 @@ class AppletJmolBinding extends JalviewJmolBinding
           Container consolePanel, String buttonsToShow)
   {
     JmolAppConsoleInterface appc = new AppletConsole();
-    appc.start(viewer);
+    appc.start(jmolViewer);
     return appc;
   }
 
@@ -173,14 +166,12 @@ class AppletJmolBinding extends JalviewJmolBinding
   @Override
   public int[] resizeInnerPanel(String data)
   {
-    // TODO Auto-generated method stub
     return null;
   }
 
   @Override
   public Map<String, Object> getJSpecViewProperty(String arg0)
   {
-    // TODO Auto-generated method stub
     return null;
   }
 }