X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAppletJmolBinding.java;h=ff1f5b22ca1ad974011508320456795e7eb458d1;hb=c0aaf84826ff25d510846bd1099e10809c4df711;hp=e22e20a03fe8f9d54cc221cd38fbf13af61e3bf6;hpb=31f1b88951cc5ff3aea7ae0bc1a9d8fbdd264ea3;p=jalview.git

diff --git a/src/jalview/appletgui/AppletJmolBinding.java b/src/jalview/appletgui/AppletJmolBinding.java
index e22e20a..ff1f5b2 100644
--- a/src/jalview/appletgui/AppletJmolBinding.java
+++ b/src/jalview/appletgui/AppletJmolBinding.java
@@ -52,7 +52,7 @@ class AppletJmolBinding extends jalview.ext.jmol.JalviewJmolBinding
           AlignmentViewPanel alignment)
   {
     AlignmentPanel ap = (AlignmentPanel) alignment;
-    if (appletJmolBinding.ap.av.showSequenceFeatures)
+    if (appletJmolBinding.ap.av.isShowSequenceFeatures())
     {
       if (appletJmolBinding.fr == null)
       {
@@ -107,7 +107,7 @@ class AppletJmolBinding extends jalview.ext.jmol.JalviewJmolBinding
   public void updateColours(Object source)
   {
     AlignmentPanel ap = (AlignmentPanel) source;
-    colourBySequence(ap.av.getShowSequenceFeatures(), ap);
+    colourBySequence(ap.av.isShowSequenceFeatures(), ap);
   }
 
   public void showUrl(String url)