X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FExtJmol.java;h=53c2f1ce316214db0af2ad9501d867142cf6b182;hb=7423fd27a25ace181a99c20b307d54b860d0fbc2;hp=8e42f2a6ebe8a3c487984674403942b77372b164;hpb=8449a33e712dfec13771d4e1b8be20bf625f190b;p=jalview.git

diff --git a/src/jalview/appletgui/ExtJmol.java b/src/jalview/appletgui/ExtJmol.java
index 8e42f2a..53c2f1c 100644
--- a/src/jalview/appletgui/ExtJmol.java
+++ b/src/jalview/appletgui/ExtJmol.java
@@ -22,14 +22,14 @@ public class ExtJmol extends JalviewJmolBinding
 
   private AlignmentPanel ap;
 
-  protected ExtJmol(jalview.appletgui.AlignFrame alframe, PDBEntry[] pdbentry, SequenceI[] seq, String[] chains,
+  protected ExtJmol(jalview.appletgui.AlignFrame alframe, PDBEntry[] pdbentry, SequenceI[][] seq, String[][] chains,
           String protocol)
   {
     super(pdbentry, seq, chains, protocol);
   }
 
   public ExtJmol(JmolViewer viewer, AlignmentPanel alignPanel,
-          SequenceI[] seqs)
+          SequenceI[][] seqs)
   {
     super(viewer);
     ap = alignPanel;