X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FFeatureRenderer.java;h=3c2715f28bb715abdaed3176ade207245f1eb59b;hb=fe654aee9b43fb9c9307830c277f1e63576826ae;hp=900de839e519dfba43a70d156243e9ba9e368bf9;hpb=2df9d1cb0e8975c84486ddc4728062e377adbb1f;p=jalview.git diff --git a/src/jalview/appletgui/FeatureRenderer.java b/src/jalview/appletgui/FeatureRenderer.java old mode 100755 new mode 100644 index 900de83..3c2715f --- a/src/jalview/appletgui/FeatureRenderer.java +++ b/src/jalview/appletgui/FeatureRenderer.java @@ -1,424 +1,525 @@ - -/* - * Jalview - A Sequence Alignment Editor and Viewer - * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation; either version 2 - * of the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License - * along with this program; if not, write to the Free Software - * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA - */ -package jalview.appletgui; - -import jalview.datamodel.*; - -import java.awt.*; - -import java.util.*; - -/** - * DOCUMENT ME! - * - * @author $author$ - * @version $Revision$ - */ -public class FeatureRenderer -{ - AlignViewport av; - - - // A higher level for grouping features of a - // particular type - Hashtable featureGroups = null; - - // This is actually an Integer held in the hashtable, - // Retrieved using the key feature type - Object currentColour; - - String [] renderOrder; - - FontMetrics fm; - int charOffset; - - /** - * Creates a new FeatureRenderer object. - * - * @param av DOCUMENT ME! - */ - public FeatureRenderer(AlignViewport av) - { - this.av = av; - initColours(); - } - - - public void transferSettings(FeatureRenderer fr) - { - renderOrder = fr.renderOrder; - featureGroups = fr.featureGroups; - featureColours = fr.featureColours; - } - - - public Color findFeatureColour(Color initialCol, SequenceI seq, int i) - { - overview = true; - if(!av.showSequenceFeatures) - return initialCol; - - lastSequence = seq; - sequenceFeatures = lastSequence.getSequenceFeatures(); - if(sequenceFeatures==null) - return initialCol; - - sfSize = sequenceFeatures.length; - - if(jalview.util.Comparison.isGap(lastSequence.getCharAt(i))) - return Color.white; - - currentColour = null; - - drawSequence(null, lastSequence, lastSequence.findPosition(i), -1,-1, -1, -1); - - if(currentColour==null) - return initialCol; - - return new Color( ((Integer)currentColour).intValue() ); - } - - /** - * This is used by the Molecule Viewer to get the accurate colour - * of the rendered sequence - */ - boolean overview = false; - - int white = Color.white.getRGB(); - public int findFeatureColour(int initialCol, int seqIndex, int column) - { - if(!av.showSequenceFeatures) - return initialCol; - - if(seqIndex!=lastSequenceIndex) - { - lastSequence = av.alignment.getSequenceAt(seqIndex); - lastSequenceIndex = seqIndex; - sequenceFeatures = lastSequence.getSequenceFeatures(); - if(sequenceFeatures==null) - return initialCol; - - sfSize = sequenceFeatures.length; - } - - - if(jalview.util.Comparison.isGap(lastSequence.getCharAt(column))) - return Color.white.getRGB(); - - currentColour = null; - - drawSequence(null, lastSequence, lastSequence.findPosition(column), -1,-1, -1, -1); - - if(currentColour==null) - return initialCol; - - return ((Integer)currentColour).intValue(); - } - - - /** - * DOCUMENT ME! - * - * @param g DOCUMENT ME! - * @param seq DOCUMENT ME! - * @param sg DOCUMENT ME! - * @param start DOCUMENT ME! - * @param end DOCUMENT ME! - * @param x1 DOCUMENT ME! - * @param y1 DOCUMENT ME! - * @param width DOCUMENT ME! - * @param height DOCUMENT ME! - */ - // String type; - // SequenceFeature sf; - int lastSequenceIndex=-1; - SequenceI lastSequence; - SequenceFeature [] sequenceFeatures; - int sfSize, sfindex, spos, epos; - - public void drawSequence(Graphics g, SequenceI seq, - int start, int end, int y1, int width, int height) - { - if ( seq.getSequenceFeatures() == null - || seq.getSequenceFeatures().length==0) - return; - - - if (av.featuresDisplayed == null || renderOrder==null) - { - findAllFeatures(); - if(av.featuresDisplayed.size()<1) - return; - - sequenceFeatures = seq.getSequenceFeatures(); - sfSize = sequenceFeatures.length; - } - if(lastSequence==null || seq!=lastSequence) - { - lastSequence = seq; - sequenceFeatures = seq.getSequenceFeatures(); - sfSize = sequenceFeatures.length; - } - if(!overview) - { - spos = lastSequence.findPosition(start); - epos = lastSequence.findPosition(end); - if(g!=null) - fm = g.getFontMetrics(); - } - String type; - for(int renderIndex=0; renderIndex epos - || sequenceFeatures[sfindex].getEnd() < spos)) - continue; - - if (overview) - { - if (sequenceFeatures[sfindex].begin <= start && - sequenceFeatures[sfindex].end >= start) - { - currentColour = av.featuresDisplayed.get(sequenceFeatures[sfindex]. - type); - } - - } - else if (sequenceFeatures[sfindex].type.equals("disulfide bond")) - { - - renderFeature(g, seq, - seq.findIndex(sequenceFeatures[sfindex].begin) - 1, - seq.findIndex(sequenceFeatures[sfindex].begin) - 1, - new Color( ( (Integer) av.featuresDisplayed.get( - sequenceFeatures[sfindex].type)).intValue()), - start, end, y1, width, height); - renderFeature(g, seq, - seq.findIndex(sequenceFeatures[sfindex].end) - 1, - seq.findIndex(sequenceFeatures[sfindex].end) - 1, - new Color( ( (Integer) av.featuresDisplayed.get( - sequenceFeatures[sfindex].type)).intValue()), - start, end, y1, width, height); - - } - else - renderFeature(g, seq, - seq.findIndex(sequenceFeatures[sfindex].begin) - 1, - seq.findIndex(sequenceFeatures[sfindex].end) - 1, - getColour(sequenceFeatures[sfindex].type), - start, end, y1, width, height); - - } - } - } - - - char s; - int i; - void renderFeature(Graphics g, SequenceI seq, - int fstart, int fend, Color featureColour, int start, int end, int y1, int width, int height) - { - - if (((fstart <= end) && (fend >= start))) - { - if (fstart < start) - { // fix for if the feature we have starts before the sequence start, - fstart = start; // but the feature end is still valid!! - } - - if (fend >= end) - { - fend = end; - } - - for (i = fstart; i <= fend; i++) - { - s = seq.getSequence().charAt(i); - - if (jalview.util.Comparison.isGap(s)) - { - continue; - } - - g.setColor(featureColour); - - g.fillRect( (i - start) * width, y1, width, height); - - if(!av.validCharWidth) - continue; - - g.setColor(Color.white); - charOffset = (width - fm.charWidth(s)) / 2; - g.drawString(String.valueOf(s), - charOffset + (width * (i - start)), - (y1 + height) - height / 5); //pady = height / 5; - - } - } - } - - void findAllFeatures() - { - av.featuresDisplayed = new Hashtable(); - Vector allfeatures = new Vector(); - for (int i = 0; i < av.alignment.getHeight(); i++) - { - SequenceFeature [] features = av.alignment.getSequenceAt(i).getSequenceFeatures(); - - if (features == null) - continue; - - int index = 0; - while (index < features.length) - { - if (!av.featuresDisplayed.containsKey(features[index].getType())) - { - av.featuresDisplayed.put(features[index].getType(), - new Integer( getColour(features[index].getType()).getRGB()) ); - allfeatures.addElement(features[index].getType()); - } - index++; - } - } - - renderOrder = new String[allfeatures.size()]; - Enumeration en = allfeatures.elements(); - int i = allfeatures.size()-1; - while(en.hasMoreElements()) - { - renderOrder[i] = en.nextElement().toString(); - i--; - } - } - - public Color getColour(String featureType) - { - return (Color)featureColours.get(featureType); - } - - public void addNewFeature(String name, Color col) - { - - setColour(name, col); - if(av.featuresDisplayed==null) - av.featuresDisplayed = new Hashtable(); - - - av.featuresDisplayed.put(name, "NOGROUP"); - } - - public void setColour(String featureType, Color col) - { - featureColours.put(featureType, col); - } - - public void setFeaturePriority(Object [][] data) - { - // The feature table will display high priority - // features at the top, but theses are the ones - // we need to render last, so invert the data - if(av.featuresDisplayed!=null) - av.featuresDisplayed.clear(); - - renderOrder = new String[data.length]; - - if (data.length > 0) - for (int i = 0; i < data.length; i++) - { - String type = data[i][0].toString(); - setColour(type, (Color) data[i][1]); - if ( ( (Boolean) data[i][2]).booleanValue()) - { - av.featuresDisplayed.put(type, new Integer(getColour(type).getRGB())); - } - - renderOrder[data.length - i - 1] = type; - } - } - - Hashtable featureColours = new Hashtable(); - void initColours() - { - featureColours.put("active site", new Color(255, 75, 0)); - featureColours.put("binding site", new Color(245, 85, 0)); - featureColours.put("calcium-binding region", new Color(235, 95, 0)); - featureColours.put("chain", new Color(225, 105, 0)); - featureColours.put("coiled-coil region", new Color(215, 115, 0)); - featureColours.put("compositionally biased region", new Color(205, 125, 0)); - featureColours.put("cross-link", new Color(195, 135, 0)); - featureColours.put("disulfide bond", new Color(185, 145, 0)); - featureColours.put("DNA-binding region", new Color(175, 155, 0)); - featureColours.put("domain", new Color(165, 165, 0)); - featureColours.put("glycosylation site", new Color(155, 175, 0)); - featureColours.put("helix", new Color(145, 185, 0)); - featureColours.put("initiator methionine", new Color(135, 195, 5)); - featureColours.put("lipid moiety-binding region", new Color(125, 205, 15)); - featureColours.put("metal ion-binding site", new Color(115, 215, 25)); - featureColours.put("modified residue", new Color(105, 225, 35)); - featureColours.put("mutagenesis site", new Color(95, 235, 45)); - featureColours.put("non-consecutive residues", new Color(85, 245, 55)); - featureColours.put("non-terminal residue", new Color(75, 255, 65)); - featureColours.put("nucleotide phosphate-binding region", - new Color(65, 245, 75)); - featureColours.put("peptide", new Color(55, 235, 85)); - featureColours.put("propeptide", new Color(45, 225, 95)); - featureColours.put("region of interest", new Color(35, 215, 105)); - featureColours.put("repeat", new Color(25, 205, 115)); - featureColours.put("selenocysteine", new Color(15, 195, 125)); - featureColours.put("sequence conflict", new Color(5, 185, 135)); - featureColours.put("sequence variant", new Color(0, 175, 145)); - featureColours.put("short sequence motif", new Color(0, 165, 155)); - featureColours.put("signal peptide", new Color(0, 155, 165)); - featureColours.put("site", new Color(0, 145, 175)); - featureColours.put("splice variant", new Color(0, 135, 185)); - featureColours.put("strand", new Color(0, 125, 195)); - featureColours.put("topological domain", new Color(0, 115, 205)); - featureColours.put("transit peptide", new Color(0, 105, 215)); - featureColours.put("transmembrane region", new Color(0, 95, 225)); - featureColours.put("turn", new Color(0, 85, 235)); - featureColours.put("unsure residue", new Color(0, 75, 245)); - featureColours.put("zinc finger region", new Color(0, 65, 255)); - } - -} - - - +/* + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ +package jalview.appletgui; + +import jalview.api.FeatureColourI; +import jalview.datamodel.SearchResults; +import jalview.datamodel.SearchResultsI; +import jalview.datamodel.SequenceFeature; +import jalview.datamodel.SequenceI; +import jalview.io.FeaturesFile; +import jalview.schemes.FeatureColour; +import jalview.util.ColorUtils; +import jalview.util.MessageManager; +import jalview.viewmodel.AlignmentViewport; + +import java.awt.BorderLayout; +import java.awt.Button; +import java.awt.Choice; +import java.awt.Color; +import java.awt.Dimension; +import java.awt.FlowLayout; +import java.awt.Font; +import java.awt.Frame; +import java.awt.Graphics; +import java.awt.GridLayout; +import java.awt.Label; +import java.awt.Panel; +import java.awt.ScrollPane; +import java.awt.TextArea; +import java.awt.TextField; +import java.awt.event.ActionEvent; +import java.awt.event.ActionListener; +import java.awt.event.MouseAdapter; +import java.awt.event.MouseEvent; +import java.awt.event.TextEvent; +import java.awt.event.TextListener; +import java.util.Hashtable; +import java.util.List; + +/** + * DOCUMENT ME! + * + * @author $author$ + * @version $Revision$ + */ +public class FeatureRenderer extends + jalview.renderer.seqfeatures.FeatureRenderer +{ + /* + * creating a new feature defaults to the type and group as + * the last one created + */ + static String lastFeatureAdded = "feature_1"; + + static String lastFeatureGroupAdded = "Jalview"; + + // Holds web links for feature groups and feature types + // in the form label|link + Hashtable featureLinks = null; + + /** + * Creates a new FeatureRenderer object. + * + * @param av + */ + public FeatureRenderer(AlignmentViewport av) + { + super(av); + + } + + int featureIndex = 0; + + boolean deleteFeature = false; + + FeatureColourPanel colourPanel; + + class FeatureColourPanel extends Panel + { + String label = ""; + + private Color maxCol; + + private boolean isColourByLabel, isGcol; + + /** + * render a feature style in the amend feature dialog box + */ + public void updateColor(FeatureColourI newcol) + { + Color bg = null; + String vlabel = ""; + if (newcol.isSimpleColour()) + { + bg = newcol.getColour(); + setBackground(bg); + } + else + { + if (newcol.isAboveThreshold()) + { + vlabel += " (>)"; + } + else if (newcol.isBelowThreshold()) + { + vlabel += " (<)"; + } + + if (isColourByLabel = newcol.isColourByLabel()) + { + setBackground(bg = Color.white); + vlabel += " (by Label)"; + } + else + { + setBackground(bg = newcol.getMinColour()); + maxCol = newcol.getMaxColour(); + } + } + label = vlabel; + setBackground(bg); + repaint(); + } + + FeatureColourPanel() + { + super(null); + } + + @Override + public void paint(Graphics g) + { + Dimension d = getSize(); + if (isGcol) + { + if (isColourByLabel) + { + g.setColor(Color.white); + g.fillRect(d.width / 2, 0, d.width / 2, d.height); + g.setColor(Color.black); + Font f = new Font("Verdana", Font.PLAIN, 10); + g.setFont(f); + g.drawString(MessageManager.getString("label.label"), 0, 0); + } + else + { + g.setColor(maxCol); + g.fillRect(d.width / 2, 0, d.width / 2, d.height); + + } + } + } + + } + + /** + * Shows a dialog allowing the user to create, or amend or delete, sequence + * features. If null in the supplied feature(s), feature type and group + * default to those for the last feature created (with initial defaults of + * "feature_1" and "Jalview"). + * + * @param sequences + * @param features + * @param create + * @param ap + * @return + */ + boolean amendFeatures(final List sequences, + final List features, boolean create, + final AlignmentPanel ap) + { + final Panel bigPanel = new Panel(new BorderLayout()); + final TextField name = new TextField(16); + final TextField group = new TextField(16); + final TextArea description = new TextArea(3, 35); + final TextField start = new TextField(8); + final TextField end = new TextField(8); + final Choice overlaps; + Button deleteButton = new Button("Delete"); + deleteFeature = false; + + name.addTextListener(new TextListener() + { + @Override + public void textValueChanged(TextEvent e) + { + warnIfTypeHidden(ap.alignFrame, name.getText()); + } + }); + group.addTextListener(new TextListener() + { + @Override + public void textValueChanged(TextEvent e) + { + warnIfGroupHidden(ap.alignFrame, group.getText()); + } + }); + colourPanel = new FeatureColourPanel(); + colourPanel.setSize(110, 15); + final FeatureRenderer fr = this; + + Panel panel = new Panel(new GridLayout(3, 1)); + + featureIndex = 0; // feature to be amended. + Panel tmp; + + // ///////////////////////////////////// + // /MULTIPLE FEATURES AT SELECTED RESIDUE + if (!create && features.size() > 1) + { + panel = new Panel(new GridLayout(4, 1)); + tmp = new Panel(); + tmp.add(new Label("Select Feature: ")); + overlaps = new Choice(); + for (SequenceFeature sf : features) + { + String item = sf.getType() + "/" + sf.getBegin() + "-" + + sf.getEnd(); + if (sf.getFeatureGroup() != null) + { + item += " (" + sf.getFeatureGroup() + ")"; + } + overlaps.addItem(item); + } + + tmp.add(overlaps); + + overlaps.addItemListener(new java.awt.event.ItemListener() + { + @Override + public void itemStateChanged(java.awt.event.ItemEvent e) + { + int index = overlaps.getSelectedIndex(); + if (index != -1) + { + featureIndex = index; + SequenceFeature sf = features.get(index); + name.setText(sf.getType()); + description.setText(sf.getDescription()); + group.setText(sf.getFeatureGroup()); + start.setText(sf.getBegin() + ""); + end.setText(sf.getEnd() + ""); + + SearchResultsI highlight = new SearchResults(); + highlight.addResult(sequences.get(0), sf.getBegin(), + sf.getEnd()); + + ap.seqPanel.seqCanvas.highlightSearchResults(highlight); + + } + FeatureColourI col = getFeatureStyle(name.getText()); + if (col == null) + { + Color generatedColour = ColorUtils.createColourFromName(name + .getText()); + col = new FeatureColour(generatedColour); + } + + colourPanel.updateColor(col); + } + }); + + panel.add(tmp); + } + // //////// + // //////////////////////////////////// + + tmp = new Panel(); + panel.add(tmp); + tmp.add(new Label(MessageManager.getString("label.name:"), Label.RIGHT)); + tmp.add(name); + + tmp = new Panel(); + panel.add(tmp); + tmp.add(new Label(MessageManager.getString("label.group:"), Label.RIGHT)); + tmp.add(group); + + tmp = new Panel(); + panel.add(tmp); + tmp.add(new Label(MessageManager.getString("label.colour"), Label.RIGHT)); + tmp.add(colourPanel); + + bigPanel.add(panel, BorderLayout.NORTH); + + panel = new Panel(); + panel.add(new Label(MessageManager.getString("label.description:"), + Label.RIGHT)); + panel.add(new ScrollPane().add(description)); + + if (!create) + { + bigPanel.add(panel, BorderLayout.SOUTH); + + panel = new Panel(); + panel.add(new Label(MessageManager.getString("label.start"), + Label.RIGHT)); + panel.add(start); + panel.add(new Label(MessageManager.getString("label.end"), + Label.RIGHT)); + panel.add(end); + bigPanel.add(panel, BorderLayout.CENTER); + } + else + { + bigPanel.add(panel, BorderLayout.CENTER); + } + + /* + * use defaults for type and group (and update them on Confirm) only + * if feature type has not been supplied by the caller + * (e.g. for Amend, or create features from Find) + */ + SequenceFeature firstFeature = features.get(0); + boolean useLastDefaults = firstFeature.getType() == null; + String featureType = useLastDefaults ? lastFeatureAdded : firstFeature + .getType(); + String featureGroup = useLastDefaults ? lastFeatureGroupAdded + : firstFeature.getFeatureGroup(); + + String title = create ? MessageManager + .getString("label.create_new_sequence_features") + : MessageManager.formatMessage("label.amend_delete_features", + new String[] { sequences.get(0).getName() }); + + final JVDialog dialog = new JVDialog(ap.alignFrame, title, true, 385, + 240); + + dialog.setMainPanel(bigPanel); + + name.setText(featureType); + group.setText(featureGroup); + + if (!create) + { + dialog.ok.setLabel(MessageManager.getString("label.amend")); + dialog.buttonPanel.add(deleteButton, 1); + deleteButton.addActionListener(new ActionListener() + { + @Override + public void actionPerformed(ActionEvent evt) + { + deleteFeature = true; + dialog.setVisible(false); + } + }); + } + + start.setText(firstFeature.getBegin() + ""); + end.setText(firstFeature.getEnd() + ""); + description.setText(firstFeature.getDescription()); + // lookup (or generate) the feature colour + FeatureColourI fcol = getFeatureStyle(name.getText()); + // simply display the feature color in a box + colourPanel.updateColor(fcol); + dialog.setResizable(true); + // TODO: render the graduated color in the box. + colourPanel.addMouseListener(new MouseAdapter() + { + @Override + public void mousePressed(MouseEvent evt) + { + if (!colourPanel.isGcol) + { + new UserDefinedColours(fr, ap.alignFrame); + } + else + { + new FeatureColourChooser(ap.alignFrame, name.getText()); + dialog.transferFocus(); + } + } + }); + dialog.setVisible(true); + + FeaturesFile ffile = new FeaturesFile(); + + /* + * only update default type and group if we used defaults + */ + String enteredType = name.getText().trim(); + if (dialog.accept && useLastDefaults) + { + lastFeatureAdded = enteredType; + lastFeatureGroupAdded = group.getText().trim(); + } + + if (!create) + { + SequenceFeature sf = features.get(featureIndex); + if (dialog.accept) + { + sf.type = enteredType; + sf.featureGroup = group.getText().trim(); + if (sf.featureGroup != null && sf.featureGroup.length() < 1) + { + sf.featureGroup = null; + } + sf.description = description.getText().replace('\n', ' '); + if (!colourPanel.isGcol) + { + // update colour - otherwise its already done. + setColour(sf.type, new FeatureColour(colourPanel.getBackground())); + } + try + { + sf.begin = Integer.parseInt(start.getText()); + sf.end = Integer.parseInt(end.getText()); + } catch (NumberFormatException ex) + { + // + } + boolean typeOrGroupChanged = (!featureType.equals(sf.type) || !featureGroup + .equals(sf.featureGroup)); + + ffile.parseDescriptionHTML(sf, false); + if (typeOrGroupChanged) + { + featuresAdded(); + } + } + if (deleteFeature) + { + sequences.get(0).deleteFeature(sf); + // ensure Feature Settings reflects removal of feature / group + featuresAdded(); + } + } + else + { + /* + * adding feature(s) + */ + if (dialog.accept && name.getText().length() > 0) + { + for (int i = 0; i < sequences.size(); i++) + { + features.get(i).type = enteredType; + features.get(i).featureGroup = group.getText().trim(); + features.get(i).description = description.getText() + .replace('\n', ' '); + sequences.get(i).addSequenceFeature(features.get(i)); + ffile.parseDescriptionHTML(features.get(i), false); + } + + Color newColour = colourPanel.getBackground(); + // setColour(lastFeatureAdded, fcol); + + setColour(enteredType, new FeatureColour(newColour)); // was fcol + featuresAdded(); + } + else + { + // no update to the alignment + return false; + } + } + // refresh the alignment and the feature settings dialog + if (((jalview.appletgui.AlignViewport) av).featureSettings != null) + { + ((jalview.appletgui.AlignViewport) av).featureSettings.refreshTable(); + } + // findAllFeatures(); + + ap.paintAlignment(true); + + return true; + } + + protected void warnIfGroupHidden(Frame frame, String group) + { + if (featureGroups.containsKey(group) && !featureGroups.get(group)) + { + String msg = MessageManager.formatMessage("label.warning_hidden", + MessageManager.getString("label.group"), group); + showWarning(frame, msg); + } + } + + protected void warnIfTypeHidden(Frame frame, String type) + { + if (getRenderOrder().contains(type)) + { + if (!showFeatureOfType(type)) + { + String msg = MessageManager.formatMessage("label.warning_hidden", + MessageManager.getString("label.feature_type"), type); + showWarning(frame, msg); + } + } + } + + /** + * @param frame + * @param msg + */ + protected void showWarning(Frame frame, String msg) + { + JVDialog d = new JVDialog(frame, "", true, 350, 200); + Panel mp = new Panel(); + d.ok.setLabel(MessageManager.getString("action.ok")); + d.cancel.setVisible(false); + mp.setLayout(new FlowLayout()); + mp.add(new Label(msg)); + d.setMainPanel(mp); + d.setVisible(true); + } +}