X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FFeatureRenderer.java;h=a93cdcbf560a0e35daada06936b73dfc565761a4;hb=36dceb54710feb97a81f4bd69ad051f316141dc3;hp=8318ee3d2b6ebba8dd9d4708df95a5b2adfa44ad;hpb=26ba864a6c290121fe6cf616794d2d0bea65fb7d;p=jalview.git

diff --git a/src/jalview/appletgui/FeatureRenderer.java b/src/jalview/appletgui/FeatureRenderer.java
index 8318ee3..a93cdcb 100644
--- a/src/jalview/appletgui/FeatureRenderer.java
+++ b/src/jalview/appletgui/FeatureRenderer.java
@@ -43,7 +43,6 @@ import java.awt.TextArea;
 import java.awt.TextField;
 import java.awt.event.ActionEvent;
 import java.awt.event.ActionListener;
-import java.util.Map;
 
 /**
  * DOCUMENT ME!
@@ -54,11 +53,6 @@ import java.util.Map;
 public class FeatureRenderer extends
         jalview.renderer.seqfeatures.FeatureRenderer
 {
-
-  // Holds web links for feature groups and feature types
-  // in the form label|link
-  Map<String, String> featureLinks = null;
-
   /**
    * Creates a new FeatureRenderer object.
    * 
@@ -69,9 +63,6 @@ public class FeatureRenderer extends
   {
     super();
     this.av = av;
-
-    setTransparencyAvailable(!System.getProperty("java.version")
-            .startsWith("1.1"));
   }
 
   static String lastFeatureAdded;
@@ -360,12 +351,6 @@ public class FeatureRenderer extends
     start.setText(features[0].getBegin() + "");
     end.setText(features[0].getEnd() + "");
     description.setText(features[0].getDescription());
-    Color col = getColour(name.getText());
-    if (col == null)
-    {
-      col = new jalview.schemes.UserColourScheme()
-              .createColourFromName(name.getText());
-    }
     Object fcol = getFeatureStyle(name.getText());
     // simply display the feature color in a box
     colourPanel.updateColor(fcol);