X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FFinder.java;h=167d8995453bb8a23d6c355001e23c1868242019;hb=refs%2Fheads%2Fpatch%2FJAL-4222_quit_with_gui_export_cli_args;hp=31c914ac53dcff78d7469ab34b6760306d2f1180;hpb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;p=jalview.git

diff --git a/src/jalview/appletgui/Finder.java b/src/jalview/appletgui/Finder.java
index 31c914a..167d899 100644
--- a/src/jalview/appletgui/Finder.java
+++ b/src/jalview/appletgui/Finder.java
@@ -20,14 +20,6 @@
  */
 package jalview.appletgui;
 
-import jalview.api.AlignViewportI;
-import jalview.api.FinderI;
-import jalview.datamodel.SearchResultMatchI;
-import jalview.datamodel.SearchResultsI;
-import jalview.datamodel.SequenceFeature;
-import jalview.datamodel.SequenceI;
-import jalview.util.MessageManager;
-
 import java.awt.Button;
 import java.awt.Checkbox;
 import java.awt.Font;
@@ -47,6 +39,14 @@ import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
 
+import jalview.api.AlignViewportI;
+import jalview.api.FinderI;
+import jalview.datamodel.SearchResultMatchI;
+import jalview.datamodel.SearchResultsI;
+import jalview.datamodel.SequenceFeature;
+import jalview.datamodel.SequenceI;
+import jalview.util.MessageManager;
+
 public class Finder extends Panel implements ActionListener
 {
   private AlignViewportI av;
@@ -172,12 +172,12 @@ public class Finder extends Panel implements ActionListener
     if (doFindAll)
     {
       finder.findAll(searchString, isCaseSensitive, doSearchDescription,
-              false);
+              false, false);
     }
     else
     {
       finder.findNext(searchString, isCaseSensitive, doSearchDescription,
-              false);
+              false, false);
     }
 
     searchResults = finder.getSearchResults();