X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FFinder.java;h=41e2a64b87ff33cd0953f388513de8111f5f0836;hb=5f3cd06105c207686e3637f40a04146076a73c87;hp=2579d91be3600a4af25d184ebe128b07a95afc7f;hpb=651ed4273f899e80f4931bed82714355e16fd837;p=jalview.git

diff --git a/src/jalview/appletgui/Finder.java b/src/jalview/appletgui/Finder.java
index 2579d91..41e2a64 100644
--- a/src/jalview/appletgui/Finder.java
+++ b/src/jalview/appletgui/Finder.java
@@ -41,6 +41,8 @@ import java.awt.event.ActionListener;
 import java.awt.event.KeyEvent;
 import java.awt.event.WindowAdapter;
 import java.awt.event.WindowEvent;
+import java.util.ArrayList;
+import java.util.List;
 import java.util.Vector;
 
 public class Finder extends Panel implements ActionListener
@@ -113,24 +115,19 @@ public class Finder extends Panel implements ActionListener
 
   public void createNewGroup_actionPerformed()
   {
-    SequenceI[] seqs = new SequenceI[searchResults.getSize()];
-    SequenceFeature[] features = new SequenceFeature[searchResults
-            .getSize()];
+    List<SequenceI> seqs = new ArrayList<SequenceI>();
+    List<SequenceFeature> features = new ArrayList<SequenceFeature>();
     String searchString = textfield.getText().trim();
 
-    int i = 0;
     for (SearchResultMatchI match : searchResults.getResults())
     {
-      seqs[i] = match.getSequence().getDatasetSequence();
-
-      features[i] = new SequenceFeature(searchString,
-              "Search Results", null, match.getStart(), match.getEnd(),
-              "Search Results");
-      i++;
+      seqs.add(match.getSequence().getDatasetSequence());
+      features.add(new SequenceFeature(searchString, "Search Results",
+              match.getStart(), match.getEnd(), "Search Results"));
     }
 
     if (ap.seqPanel.seqCanvas.getFeatureRenderer().amendFeatures(seqs,
-            features, true, ap, searchString))
+            features, true, ap))
     {
       ap.alignFrame.sequenceFeatures.setState(true);
       av.setShowSequenceFeatures(true);