X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FFinder.java;h=b1dcb880af79c0b3c422a00fe64709ffc998d039;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hp=529b0b388b12967a58ee4311ba4acfc5a9e93bde;hpb=50bc9bfda9c71e968f53e6a77ba3ea9cdfd6d3ee;p=jalview.git

diff --git a/src/jalview/appletgui/Finder.java b/src/jalview/appletgui/Finder.java
index 529b0b3..b1dcb88 100644
--- a/src/jalview/appletgui/Finder.java
+++ b/src/jalview/appletgui/Finder.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -24,6 +24,7 @@ import jalview.datamodel.SearchResults;
 import jalview.datamodel.SequenceFeature;
 import jalview.datamodel.SequenceI;
 import jalview.util.MessageManager;
+import jalview.viewmodel.AlignmentViewport;
 
 import java.awt.Button;
 import java.awt.Checkbox;
@@ -43,7 +44,7 @@ import java.util.Vector;
 
 public class Finder extends Panel implements ActionListener
 {
-  AlignViewport av;
+  AlignmentViewport av;
 
   AlignmentPanel ap;
 
@@ -126,7 +127,7 @@ public class Finder extends Panel implements ActionListener
             features, true, ap))
     {
       ap.alignFrame.sequenceFeatures.setState(true);
-      av.showSequenceFeatures(true);
+      av.setShowSequenceFeatures(true);
       ap.highlightSearchResults(null);
     }
   }
@@ -203,16 +204,15 @@ public class Finder extends Panel implements ActionListener
           message += searchResults.getSize() + " subsequence matches.";
         }
         ap.alignFrame.statusBar.setText(MessageManager.formatMessage(
-                "label.search_results", new String[]
-                { searchString, message }));
+                "label.search_results", new String[] { searchString,
+                    message }));
 
       }
       else
       {
         // TODO: indicate sequence and matching position in status bar
         ap.alignFrame.statusBar.setText(MessageManager.formatMessage(
-                "label.found_match_for", new String[]
-                { searchString }));
+                "label.found_match_for", new String[] { searchString }));
       }
     }
   }