X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FSeqCanvas.java;h=8ffad089b1ce96cf2dfdb16a1dec38fef46c8935;hb=8da7acff9214ddaf0e6d28e76219ab51bd38e62d;hp=3202fc44e803b1a56999cbabd7d2b827e0b71edf;hpb=019042a9f87d94260b3060cdf45ab93ca714a46d;p=jalview.git

diff --git a/src/jalview/appletgui/SeqCanvas.java b/src/jalview/appletgui/SeqCanvas.java
index 3202fc4..8ffad08 100755
--- a/src/jalview/appletgui/SeqCanvas.java
+++ b/src/jalview/appletgui/SeqCanvas.java
@@ -21,7 +21,6 @@ package jalview.appletgui;
 
 import java.awt.*;
 
-import jalview.analysis.*;
 import jalview.datamodel.*;
 
 public class SeqCanvas
@@ -242,7 +241,7 @@ public class SeqCanvas
 
     if (av.getWrapAlignment())
     {
-      drawWrappedPanel(gg, getSize().width, getSize().height, av.startRes);
+      drawWrappedPanel(gg, imgWidth, imgHeight, av.startRes);
     }
     else
     {
@@ -339,24 +338,16 @@ public class SeqCanvas
         drawNorthScale(g, startRes, endx, ypos);
       }
 
-      // When printing we have an extra clipped region,
-      // the Printable page which we need to account for here
-      Shape clip = g.getClip();
-      if (clip == null)
-      {
-        g.setClip(0, 0, cWidth * av.charWidth, canvasHeight);
-      }
-      else
-      {
-        g.setClip(0,
-                  (int) clip.getBounds().y,
-                  cWidth * av.charWidth,
-                  (int) clip.getBounds().height
-            );
-      }
 
-      drawPanel(g, startRes, endx, 0, al.getHeight(), startRes, 0, ypos);
-      g.setClip(clip);
+     if(g.getClip()==null)
+       g.setClip(0, 0, cWidth * av.charWidth, canvasHeight);
+
+     if (av.alignment.getWidth() >= av.vconsensus.size())
+     {
+       endx = av.vconsensus.size() - 2;
+     }
+     drawPanel(g, startRes, endx, 0, al.getHeight(), startRes, 0, ypos);
+      g.setClip(null);
       g.translate( -LABEL_WEST, 0);
 
       ypos += cHeight;