X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FSeqPanel.java;h=665a444eab1f667ba58370fae97e8fc265860c22;hb=b8d09897dacc7b0ad203982b4578e2c1d8929142;hp=9d14b2637545527f2fa594c0eb13b0c386e3fa98;hpb=2f6e9f2fc3f6d683df3caf63186aac36d9e5f8fc;p=jalview.git

diff --git a/src/jalview/appletgui/SeqPanel.java b/src/jalview/appletgui/SeqPanel.java
index 9d14b26..665a444 100755
--- a/src/jalview/appletgui/SeqPanel.java
+++ b/src/jalview/appletgui/SeqPanel.java
@@ -593,37 +593,28 @@ public class SeqPanel
 
   public void doMouseReleasedDefineMode(MouseEvent evt)
   {
-    mouseDragging = false;
+    if(mouseDragging)
+     {
+       stretchGroup.recalcConservation();
+       mouseDragging = false;
+     }
 
     if (stretchGroup == null)
     {
       return;
     }
 
-    stretchGroup.recalcConservation();
-
-    if (stretchGroup.cs instanceof ClustalxColourScheme)
-    {
-      stretchGroup.cs = new ClustalxColourScheme(stretchGroup.sequences,
-                                                 av.alignment.getWidth());
-    }
-
-    else if (stretchGroup.cs instanceof ConservationColourScheme)
+    if (stretchGroup.cs instanceof ConservationColourScheme)
     {
       ConservationColourScheme ccs = (ConservationColourScheme) stretchGroup.cs;
       stretchGroup.cs = ccs;
       SliderPanel.setConservationSlider(ap, stretchGroup.cs,
                                         stretchGroup.getName());
-
     }
     else
     {
-      if (stretchGroup.cs != null)
-      {
         SliderPanel.setPIDSliderSource(ap, stretchGroup.cs,
                                        stretchGroup.getName());
-      }
-
     }
 
     changeEndRes = false;
@@ -707,7 +698,6 @@ public class SeqPanel
       if (stretchGroup.sequences.contains(nextSeq))
       {
         stretchGroup.deleteSequence(seq, false);
-        stretchGroup.deleteSequence(nextSeq, false);
       }
       else
       {