X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FSplitFrame.java;fp=src%2Fjalview%2Fappletgui%2FSplitFrame.java;h=777e307e2d1b68b8525767f7d1b2de1d8341c571;hb=106a3890f956e2aa7780b2985f4326655912a558;hp=ed531d3edcacca690ad7e41ac2ce5aacf68359d9;hpb=98558735e9208afa98bb155bd5350ad0a680ca24;p=jalview.git

diff --git a/src/jalview/appletgui/SplitFrame.java b/src/jalview/appletgui/SplitFrame.java
index ed531d3..777e307 100644
--- a/src/jalview/appletgui/SplitFrame.java
+++ b/src/jalview/appletgui/SplitFrame.java
@@ -187,9 +187,9 @@ public class SplitFrame extends EmbmenuFrame
     createSplitFrameWindow(embedded, applet);
     validate();
     topFrame.alignPanel.adjustAnnotationHeight();
-    topFrame.alignPanel.paintAlignment(true);
+    topFrame.alignPanel.paintAlignment(true, true);
     bottomFrame.alignPanel.adjustAnnotationHeight();
-    bottomFrame.alignPanel.paintAlignment(true);
+    bottomFrame.alignPanel.paintAlignment(true, true);
   }
 
   /**