X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FTreeCanvas.java;h=2e5f93884eef308441c1fb29ffa7c3dced893b2d;hb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;hp=6ee75bd8a723586cc61e54a590ed8e0b1018b08f;hpb=3d0101179759ef157b088ea135423cd909512d9f;p=jalview.git diff --git a/src/jalview/appletgui/TreeCanvas.java b/src/jalview/appletgui/TreeCanvas.java index 6ee75bd..2e5f938 100755 --- a/src/jalview/appletgui/TreeCanvas.java +++ b/src/jalview/appletgui/TreeCanvas.java @@ -631,7 +631,7 @@ public class TreeCanvas extends Panel Vector l = tree.findLeaves(groups.get(i)); - Vector sequences = new Vector(); + Vector sequences = new Vector<>(); for (int j = 0; j < l.size(); j++) { SequenceI s1 = (SequenceI) l.elementAt(j).element(); @@ -657,8 +657,9 @@ public class TreeCanvas extends Panel } else { - cs = ColourSchemeProperty.getColourScheme(sg, ColourSchemeProperty - .getColourName(av.getGlobalColourScheme())); + cs = ColourSchemeProperty.getColourScheme(av, sg, + ColourSchemeProperty + .getColourName(av.getGlobalColourScheme())); } // cs is null if shading is an annotationColourGradient // if (cs != null)