X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FTreeCanvas.java;h=da8f91eb54a8cf75fb0c2ed441eeaf09d0a00762;hb=4663ab6ec8142df859d031bff618d78809e22082;hp=745520b5f91fe4d057f4cf9ec7e03765bb0afced;hpb=c5e9e6987402a15dc3a58e9d5e4d54be6760ef79;p=jalview.git

diff --git a/src/jalview/appletgui/TreeCanvas.java b/src/jalview/appletgui/TreeCanvas.java
index 745520b..da8f91e 100755
--- a/src/jalview/appletgui/TreeCanvas.java
+++ b/src/jalview/appletgui/TreeCanvas.java
@@ -639,7 +639,7 @@ public class TreeCanvas extends Panel implements MouseListener,
         if (cs != null)
         {
           cs.setThreshold(av.getGlobalColourScheme().getThreshold(),
-                  av.getIgnoreGapsConsensus());
+                  av.isIgnoreGapsConsensus());
         }
       }
       // TODO: cs used to be initialized with a sequence collection and