X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FCache.java;h=8412dabcc0bbd700627fdcb1189a00fa924fc774;hb=7dc7fb2a35c435d825bc91c5ae60ec6073419a69;hp=df71cccf5deaab70bfc5e82c6d2e5364c37d441e;hpb=954a2905b057267c6f6c694034972809727ecfbb;p=jalview.git diff --git a/src/jalview/bin/Cache.java b/src/jalview/bin/Cache.java index df71ccc..8412dab 100755 --- a/src/jalview/bin/Cache.java +++ b/src/jalview/bin/Cache.java @@ -228,11 +228,11 @@ public class Cache private final static String DEFAULT_CACHE_THRESHOLD_IN_DAYS = "2"; private final static String DEFAULT_FAIL_SAFE_PID_THRESHOLD = "30"; - + /** * Allowed values are PDB or mmCIF */ - private final static String DEFAULT_STRUCTURE_FORMAT = PDBEntry.Type.MMCIF + private final static String PDB_DOWNLOAD_FORMAT = PDBEntry.Type.MMCIF .toString(); private final static String DEFAULT_PDB_FILE_PARSER = StructureImportSettings.StructureParser.JMOL_PARSER @@ -444,11 +444,12 @@ public class Cache .println("Jalview Version: " + codeVersion + codeInstallation); StructureImportSettings.setDefaultStructureFileFormat(jalview.bin.Cache - .getDefault( - "DEFAULT_STRUCTURE_FORMAT", DEFAULT_STRUCTURE_FORMAT)); + .getDefault("PDB_DOWNLOAD_FORMAT", PDB_DOWNLOAD_FORMAT)); StructureImportSettings - .setDefaultPDBFileParser(jalview.bin.Cache.getDefault( - "DEFAULT_PDB_FILE_PARSER", DEFAULT_PDB_FILE_PARSER)); + .setDefaultPDBFileParser(DEFAULT_PDB_FILE_PARSER); + // StructureImportSettings + // .setDefaultPDBFileParser(jalview.bin.Cache.getDefault( + // "DEFAULT_PDB_FILE_PARSER", DEFAULT_PDB_FILE_PARSER)); // jnlpVersion will be null if we're using InstallAnywhere // Dont do this check if running in headless mode if (jnlpVersion == null @@ -894,7 +895,7 @@ public class Cache { setProperty(property, jalview.util.Format.getHexString(colour)); } - + /** * Stores a formatted date in a jalview property, using a fixed locale. *