X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FCommands.java;fp=src%2Fjalview%2Fbin%2FCommands.java;h=d83afed97e9a54d68b8679009e2f1b979a30c751;hb=59e9fd112bcb8cb4c5cfd344562e7edfc3ea8359;hp=84effe016b529403f0be1db10d11e93fb669f20c;hpb=fb1fb73bd1e6b08de09932c98d39b847dda1cf9a;p=jalview.git

diff --git a/src/jalview/bin/Commands.java b/src/jalview/bin/Commands.java
index 84effe0..d83afed 100644
--- a/src/jalview/bin/Commands.java
+++ b/src/jalview/bin/Commands.java
@@ -576,9 +576,9 @@ public class Commands
           }
           try
           {
+            while (sv.isBusy())
             {
-              while (sv.isBusy())
-                Thread.sleep(25);
+              Thread.sleep(25);
               if (sv.isBusy())
               {
                 Console.debug(
@@ -587,7 +587,7 @@ public class Commands
             }
           } catch (Exception x)
           {
-
+            Console.warn("Exception whilst waiting for structure viewer "+structureFilepath,x);
           }
           Console.debug("Successfully opened viewer for "+structureFilepath);
           String structureImageFilename = ArgParser.getValueFromSubValOrArg(