X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FCommands.java;h=e6c7b544dbe3f2b80f351b36b2b211588a7995f2;hb=0798a7c77a9f2193cc7179215d28197c7a443e16;hp=cd72e60db63deb1201a05d3d4be33c1e84c074e7;hpb=7b5d11bce39b76612773aa4d606ffbe55bb86a02;p=jalview.git

diff --git a/src/jalview/bin/Commands.java b/src/jalview/bin/Commands.java
index cd72e60..e6c7b54 100644
--- a/src/jalview/bin/Commands.java
+++ b/src/jalview/bin/Commands.java
@@ -14,6 +14,7 @@ import java.util.Map;
 
 import jalview.analysis.AlignmentUtils;
 import jalview.api.structures.JalviewStructureDisplayI;
+import jalview.bin.Jalview.ExitCode;
 import jalview.bin.argparser.Arg;
 import jalview.bin.argparser.ArgParser;
 import jalview.bin.argparser.ArgParser.Position;
@@ -161,7 +162,9 @@ public class Commands
 
     if (argParser.getBoolean(Arg.QUIT))
     {
-      Jalview.exit("Exiting due to " + Arg.QUIT.argString(), 0);
+      Jalview.getInstance().exit(
+              "Exiting due to " + Arg.QUIT.argString() + " argument.",
+              ExitCode.OK);
       return true;
     }
     // carry on with jalview.bin.Jalview
@@ -441,7 +444,8 @@ public class Commands
       {
         if (headless)
         {
-          Jalview.exit("Could not open any files in headless mode", 1);
+          Jalview.exit("Could not open any files in headless mode",
+                  ExitCode.NO_FILES);
         }
         else
         {