X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FJalviewLite.java;h=7fa514710dbf1cfbfeca9faed7d1c98beffe759b;hb=f14246a28441f24b39b0516282513fbf6196e46c;hp=e01ab5772389d8073e905a6ee4852136e3708c63;hpb=67ba2560892f47d848754a97c7a809c7b8f8b3fb;p=jalview.git diff --git a/src/jalview/bin/JalviewLite.java b/src/jalview/bin/JalviewLite.java index e01ab57..7fa5147 100644 --- a/src/jalview/bin/JalviewLite.java +++ b/src/jalview/bin/JalviewLite.java @@ -38,8 +38,8 @@ import jalview.datamodel.SequenceI; import jalview.io.AnnotationFile; import jalview.io.AppletFormatAdapter; import jalview.io.DataSourceType; -import jalview.io.FileFormat; import jalview.io.FileFormatI; +import jalview.io.FileFormats; import jalview.io.FileParse; import jalview.io.IdentifyFile; import jalview.io.JPredFile; @@ -518,7 +518,7 @@ public class JalviewLite extends Applet implements { try { - FileFormatI theFormat = FileFormat.valueOf(format); + FileFormatI theFormat = FileFormats.getInstance().forName(format); boolean seqlimits = suffix.equalsIgnoreCase(TRUE); if (alf.viewport.getSelectionGroup() != null) { @@ -716,7 +716,7 @@ public class JalviewLite extends Applet implements { boolean seqlimits = suffix.equalsIgnoreCase(TRUE); - FileFormatI theFormat = FileFormat.valueOf(format); + FileFormatI theFormat = FileFormats.getInstance().forName(format); String reply = new AppletFormatAdapter().formatSequences(theFormat, alf.viewport.getAlignment(), seqlimits); return reply;