X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FJalviewLite.java;h=ae5c63f883a86b951e0373b898c00101e6703577;hb=6dd554fdbf34db6b79595d5027159d20225f4894;hp=cb9d893a2296a15ef84508aa8e3ba65c7dca10aa;hpb=febd250089c9672b66d2c7a5ed0c06e0763c2233;p=jalview.git

diff --git a/src/jalview/bin/JalviewLite.java b/src/jalview/bin/JalviewLite.java
index cb9d893..ae5c63f 100644
--- a/src/jalview/bin/JalviewLite.java
+++ b/src/jalview/bin/JalviewLite.java
@@ -20,30 +20,6 @@
  */
 package jalview.bin;
 
-import java.applet.Applet;
-import java.awt.Button;
-import java.awt.Color;
-import java.awt.Component;
-import java.awt.EventQueue;
-import java.awt.Font;
-import java.awt.Frame;
-import java.awt.Graphics;
-import java.awt.event.ActionEvent;
-import java.awt.event.WindowAdapter;
-import java.awt.event.WindowEvent;
-import java.io.BufferedReader;
-import java.io.IOException;
-import java.io.InputStream;
-import java.io.InputStreamReader;
-import java.net.URL;
-import java.util.Hashtable;
-import java.util.List;
-import java.util.StringTokenizer;
-import java.util.Vector;
-
-import netscape.javascript.JSException;
-import netscape.javascript.JSObject;
-
 import jalview.api.StructureSelectionManagerProvider;
 import jalview.appletgui.AlignFrame;
 import jalview.appletgui.AlignViewport;
@@ -72,6 +48,30 @@ import jalview.structure.SelectionListener;
 import jalview.structure.StructureSelectionManager;
 import jalview.util.MessageManager;
 
+import java.applet.Applet;
+import java.awt.Button;
+import java.awt.Color;
+import java.awt.Component;
+import java.awt.EventQueue;
+import java.awt.Font;
+import java.awt.Frame;
+import java.awt.Graphics;
+import java.awt.event.ActionEvent;
+import java.awt.event.WindowAdapter;
+import java.awt.event.WindowEvent;
+import java.io.BufferedReader;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.InputStreamReader;
+import java.net.URL;
+import java.util.Hashtable;
+import java.util.List;
+import java.util.StringTokenizer;
+import java.util.Vector;
+
+import netscape.javascript.JSException;
+import netscape.javascript.JSObject;
+
 /**
  * Jalview Applet. Runs in Java 1.18 runtime
  * 
@@ -847,7 +847,7 @@ public class JalviewLite extends Applet implements
    */
   public AlignFrame loadAlignment(String text, String title)
   {
-    Alignment al = null;
+    AlignmentI al = null;
 
     String format = new IdentifyFile().Identify(text,
             AppletFormatAdapter.PASTE);
@@ -1242,7 +1242,7 @@ public class JalviewLite extends Applet implements
 
   String file = "No file";
 
-  String file2 = "No file";
+  String file2 = null;
 
   Button launcher = new Button(
           MessageManager.getString("label.start_jalview"));
@@ -1459,7 +1459,7 @@ public class JalviewLite extends Applet implements
         file = data.toString();
       }
     }
-    if ("true".equalsIgnoreCase(getParameter("enableSplitFrame")))
+    if (TRUE.equalsIgnoreCase(getParameter("enableSplitFrame")))
     {
       file2 = getParameter("file2");
     }