X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FJalviewLite.java;h=d7b064ad4a69567a8491c29744d89cde56989dae;hb=b2014a1ca8c4ceee99933578e6cece2c3028c4f3;hp=de011ea45fcabb9e037f5ca8ab77ebf2e7835d7c;hpb=cd4e2687751aab1c9c5974e6966e610a3332236b;p=jalview.git diff --git a/src/jalview/bin/JalviewLite.java b/src/jalview/bin/JalviewLite.java index de011ea..d7b064a 100644 --- a/src/jalview/bin/JalviewLite.java +++ b/src/jalview/bin/JalviewLite.java @@ -38,8 +38,8 @@ import jalview.datamodel.SequenceI; import jalview.io.AnnotationFile; import jalview.io.AppletFormatAdapter; import jalview.io.DataSourceType; -import jalview.io.FileFormat; import jalview.io.FileFormatI; +import jalview.io.FileFormats; import jalview.io.FileParse; import jalview.io.IdentifyFile; import jalview.io.JPredFile; @@ -517,7 +517,7 @@ public class JalviewLite extends Applet implements { try { - FileFormatI theFormat = FileFormat.valueOf(format); + FileFormatI theFormat = FileFormats.getInstance().forName(format); boolean seqlimits = suffix.equalsIgnoreCase(TRUE); if (alf.viewport.getSelectionGroup() != null) { @@ -715,7 +715,7 @@ public class JalviewLite extends Applet implements { boolean seqlimits = suffix.equalsIgnoreCase(TRUE); - FileFormatI theFormat = FileFormat.valueOf(format); + FileFormatI theFormat = FileFormats.getInstance().forName(format); String reply = new AppletFormatAdapter().formatSequences(theFormat, alf.viewport.getAlignment(), seqlimits); return reply;