X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FJalviewLiteURLRetrieve.java;h=f2ffda58222a7190b64c846418a508667871d5f3;hb=ed379d3f998a6aea83ce8c9cdaab2ec8234adb6a;hp=156e1461fb39e314c00bac97b2e5da1236fdd0aa;hpb=ee198b3ca3687f18a2ee186f4e7c7330f4ea30f0;p=jalview.git diff --git a/src/jalview/bin/JalviewLiteURLRetrieve.java b/src/jalview/bin/JalviewLiteURLRetrieve.java index 156e146..f2ffda5 100644 --- a/src/jalview/bin/JalviewLiteURLRetrieve.java +++ b/src/jalview/bin/JalviewLiteURLRetrieve.java @@ -25,6 +25,7 @@ import jalview.io.AppletFormatAdapter; import jalview.io.DataSourceType; import jalview.io.FileFormat; import jalview.io.FileFormatI; +import jalview.io.FileFormats; import jalview.io.FileParse; import jalview.io.IdentifyFile; @@ -85,8 +86,8 @@ public class JalviewLiteURLRetrieve extends Applet } catch (Exception ex) { - System.out.println("Exception checking resources: " + file + " " - + ex); + System.out.println( + "Exception checking resources: " + file + " " + ex); } if (file.indexOf("://") > -1) { @@ -115,7 +116,8 @@ public class JalviewLiteURLRetrieve extends Applet + " cannot be read with protocol==" + protocol); return; } - FileFormatI format = FileFormat.valueOf(getParameter("format")); + FileFormatI format = FileFormats.getInstance() + .forName(getParameter("format")); if (format == null) { format = new IdentifyFile().identify(file, protocol); @@ -136,8 +138,8 @@ public class JalviewLiteURLRetrieve extends Applet } if (al != null) { - System.out.println(new AppletFormatAdapter().formatSequences( - FileFormat.Fasta, al, false)); + System.out.println(new AppletFormatAdapter() + .formatSequences(FileFormat.Fasta, al, false)); } } catch (Exception e) {