X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FJalviewLiteURLRetrieve.java;h=fd8802812a87ba7a9486abd98844cac51a275fba;hb=41555168f6feea9e3fe407bb2f79f115336e2136;hp=2eb1d919ec15ea20c823c8896fdf930d15b5972f;hpb=865a855a4ca87eadb3e5ff284ed32ed307d9c34b;p=jalview.git

diff --git a/src/jalview/bin/JalviewLiteURLRetrieve.java b/src/jalview/bin/JalviewLiteURLRetrieve.java
index 2eb1d91..fd88028 100644
--- a/src/jalview/bin/JalviewLiteURLRetrieve.java
+++ b/src/jalview/bin/JalviewLiteURLRetrieve.java
@@ -1,24 +1,26 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.bin;
 
-import jalview.datamodel.Alignment;
+import jalview.datamodel.AlignmentI;
 import jalview.io.AppletFormatAdapter;
 import jalview.io.FileParse;
 
@@ -111,14 +113,14 @@ public class JalviewLiteURLRetrieve extends Applet
       String format = getParameter("format");
       if (format == null || format.length() == 0)
       {
-        format = new jalview.io.IdentifyFile().Identify(file, protocol);
+        format = new jalview.io.IdentifyFile().identify(file, protocol);
         System.out.println("Format is " + format);
       }
       else
       {
         System.out.println("User specified Format is " + format);
       }
-      Alignment al = null;
+      AlignmentI al = null;
       try
       {
         al = new AppletFormatAdapter().readFile(file, protocol, format);