X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FJalviewLiteURLRetrieve.java;h=fd8802812a87ba7a9486abd98844cac51a275fba;hb=4b4c98b3be626bff6d72048447ebbac6070c2ee4;hp=462cb819fceb22f3102ddde28faa8e77e3ad0924;hpb=ad15cff29620f960119f80176f1fd443da9f6763;p=jalview.git diff --git a/src/jalview/bin/JalviewLiteURLRetrieve.java b/src/jalview/bin/JalviewLiteURLRetrieve.java index 462cb81..fd88028 100644 --- a/src/jalview/bin/JalviewLiteURLRetrieve.java +++ b/src/jalview/bin/JalviewLiteURLRetrieve.java @@ -20,7 +20,7 @@ */ package jalview.bin; -import jalview.datamodel.Alignment; +import jalview.datamodel.AlignmentI; import jalview.io.AppletFormatAdapter; import jalview.io.FileParse; @@ -113,14 +113,14 @@ public class JalviewLiteURLRetrieve extends Applet String format = getParameter("format"); if (format == null || format.length() == 0) { - format = new jalview.io.IdentifyFile().Identify(file, protocol); + format = new jalview.io.IdentifyFile().identify(file, protocol); System.out.println("Format is " + format); } else { System.out.println("User specified Format is " + format); } - Alignment al = null; + AlignmentI al = null; try { al = new AppletFormatAdapter().readFile(file, protocol, format);