X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbinding%2FColour.java;h=c041723862c34458191616a89097ec38605485e5;hb=1b3b9ada9b959de9d66b1d477bb155a0c6668c8e;hp=488ff9820fca713e02c0b14a9736d5dd746a4e07;hpb=4486cbff6855402579eff5ccbada47f15a5e8653;p=jalview.git

diff --git a/src/jalview/binding/Colour.java b/src/jalview/binding/Colour.java
index 488ff98..c041723 100755
--- a/src/jalview/binding/Colour.java
+++ b/src/jalview/binding/Colour.java
@@ -36,6 +36,66 @@ public class Colour implements java.io.Serializable {
      */
     private java.lang.String _RGB;
 
+    /**
+     * Field _minRGB.
+     */
+    private java.lang.String _minRGB;
+
+    /**
+     * loosely specified enumeration: NONE,ABOVE, or BELOW
+     */
+    private java.lang.String _threshType;
+
+    /**
+     * Field _threshold.
+     */
+    private float _threshold;
+
+    /**
+     * keeps track of state for field: _threshold
+     */
+    private boolean _has_threshold;
+
+    /**
+     * Field _max.
+     */
+    private float _max;
+
+    /**
+     * keeps track of state for field: _max
+     */
+    private boolean _has_max;
+
+    /**
+     * Field _min.
+     */
+    private float _min;
+
+    /**
+     * keeps track of state for field: _min
+     */
+    private boolean _has_min;
+
+    /**
+     * Field _colourByLabel.
+     */
+    private boolean _colourByLabel;
+
+    /**
+     * keeps track of state for field: _colourByLabel
+     */
+    private boolean _has_colourByLabel;
+
+    /**
+     * Field _autoScale.
+     */
+    private boolean _autoScale;
+
+    /**
+     * keeps track of state for field: _autoScale
+     */
+    private boolean _has_autoScale;
+
 
       //----------------/
      //- Constructors -/
@@ -51,6 +111,91 @@ public class Colour implements java.io.Serializable {
     //-----------/
 
     /**
+     */
+    public void deleteAutoScale(
+    ) {
+        this._has_autoScale= false;
+    }
+
+    /**
+     */
+    public void deleteColourByLabel(
+    ) {
+        this._has_colourByLabel= false;
+    }
+
+    /**
+     */
+    public void deleteMax(
+    ) {
+        this._has_max= false;
+    }
+
+    /**
+     */
+    public void deleteMin(
+    ) {
+        this._has_min= false;
+    }
+
+    /**
+     */
+    public void deleteThreshold(
+    ) {
+        this._has_threshold= false;
+    }
+
+    /**
+     * Returns the value of field 'autoScale'.
+     * 
+     * @return the value of field 'AutoScale'.
+     */
+    public boolean getAutoScale(
+    ) {
+        return this._autoScale;
+    }
+
+    /**
+     * Returns the value of field 'colourByLabel'.
+     * 
+     * @return the value of field 'ColourByLabel'.
+     */
+    public boolean getColourByLabel(
+    ) {
+        return this._colourByLabel;
+    }
+
+    /**
+     * Returns the value of field 'max'.
+     * 
+     * @return the value of field 'Max'.
+     */
+    public float getMax(
+    ) {
+        return this._max;
+    }
+
+    /**
+     * Returns the value of field 'min'.
+     * 
+     * @return the value of field 'Min'.
+     */
+    public float getMin(
+    ) {
+        return this._min;
+    }
+
+    /**
+     * Returns the value of field 'minRGB'.
+     * 
+     * @return the value of field 'MinRGB'.
+     */
+    public java.lang.String getMinRGB(
+    ) {
+        return this._minRGB;
+    }
+
+    /**
      * Returns the value of field 'name'.
      * 
      * @return the value of field 'Name'.
@@ -71,6 +216,98 @@ public class Colour implements java.io.Serializable {
     }
 
     /**
+     * Returns the value of field 'threshType'. The field
+     * 'threshType' has the following description: loosely
+     * specified enumeration: NONE,ABOVE, or BELOW
+     * 
+     * @return the value of field 'ThreshType'.
+     */
+    public java.lang.String getThreshType(
+    ) {
+        return this._threshType;
+    }
+
+    /**
+     * Returns the value of field 'threshold'.
+     * 
+     * @return the value of field 'Threshold'.
+     */
+    public float getThreshold(
+    ) {
+        return this._threshold;
+    }
+
+    /**
+     * Method hasAutoScale.
+     * 
+     * @return true if at least one AutoScale has been added
+     */
+    public boolean hasAutoScale(
+    ) {
+        return this._has_autoScale;
+    }
+
+    /**
+     * Method hasColourByLabel.
+     * 
+     * @return true if at least one ColourByLabel has been added
+     */
+    public boolean hasColourByLabel(
+    ) {
+        return this._has_colourByLabel;
+    }
+
+    /**
+     * Method hasMax.
+     * 
+     * @return true if at least one Max has been added
+     */
+    public boolean hasMax(
+    ) {
+        return this._has_max;
+    }
+
+    /**
+     * Method hasMin.
+     * 
+     * @return true if at least one Min has been added
+     */
+    public boolean hasMin(
+    ) {
+        return this._has_min;
+    }
+
+    /**
+     * Method hasThreshold.
+     * 
+     * @return true if at least one Threshold has been added
+     */
+    public boolean hasThreshold(
+    ) {
+        return this._has_threshold;
+    }
+
+    /**
+     * Returns the value of field 'autoScale'.
+     * 
+     * @return the value of field 'AutoScale'.
+     */
+    public boolean isAutoScale(
+    ) {
+        return this._autoScale;
+    }
+
+    /**
+     * Returns the value of field 'colourByLabel'.
+     * 
+     * @return the value of field 'ColourByLabel'.
+     */
+    public boolean isColourByLabel(
+    ) {
+        return this._colourByLabel;
+    }
+
+    /**
      * Method isValid.
      * 
      * @return true if this object is valid according to the schema
@@ -118,6 +355,60 @@ public class Colour implements java.io.Serializable {
     }
 
     /**
+     * Sets the value of field 'autoScale'.
+     * 
+     * @param autoScale the value of field 'autoScale'.
+     */
+    public void setAutoScale(
+            final boolean autoScale) {
+        this._autoScale = autoScale;
+        this._has_autoScale = true;
+    }
+
+    /**
+     * Sets the value of field 'colourByLabel'.
+     * 
+     * @param colourByLabel the value of field 'colourByLabel'.
+     */
+    public void setColourByLabel(
+            final boolean colourByLabel) {
+        this._colourByLabel = colourByLabel;
+        this._has_colourByLabel = true;
+    }
+
+    /**
+     * Sets the value of field 'max'.
+     * 
+     * @param max the value of field 'max'.
+     */
+    public void setMax(
+            final float max) {
+        this._max = max;
+        this._has_max = true;
+    }
+
+    /**
+     * Sets the value of field 'min'.
+     * 
+     * @param min the value of field 'min'.
+     */
+    public void setMin(
+            final float min) {
+        this._min = min;
+        this._has_min = true;
+    }
+
+    /**
+     * Sets the value of field 'minRGB'.
+     * 
+     * @param minRGB the value of field 'minRGB'.
+     */
+    public void setMinRGB(
+            final java.lang.String minRGB) {
+        this._minRGB = minRGB;
+    }
+
+    /**
      * Sets the value of field 'name'.
      * 
      * @param name the value of field 'name'.
@@ -138,6 +429,29 @@ public class Colour implements java.io.Serializable {
     }
 
     /**
+     * Sets the value of field 'threshType'. The field 'threshType'
+     * has the following description: loosely specified
+     * enumeration: NONE,ABOVE, or BELOW
+     * 
+     * @param threshType the value of field 'threshType'.
+     */
+    public void setThreshType(
+            final java.lang.String threshType) {
+        this._threshType = threshType;
+    }
+
+    /**
+     * Sets the value of field 'threshold'.
+     * 
+     * @param threshold the value of field 'threshold'.
+     */
+    public void setThreshold(
+            final float threshold) {
+        this._threshold = threshold;
+        this._has_threshold = true;
+    }
+
+    /**
      * Method unmarshal.
      * 
      * @param reader