X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbinding%2FJSeq.java;h=751409f0b161223878e176c9ab5f6389894670bc;hb=e657ed3c87bbdbaef21efe142d8123f29617d357;hp=9e02e6008c9183217837086591caa688f53ac03f;hpb=99c58ee0ae2a848f982552e53feaf6d5cb9925e5;p=jalview.git

diff --git a/src/jalview/binding/JSeq.java b/src/jalview/binding/JSeq.java
index 9e02e60..751409f 100755
--- a/src/jalview/binding/JSeq.java
+++ b/src/jalview/binding/JSeq.java
@@ -1,29 +1,10 @@
 /*
- * This class was automatically generated with
+ * This class was automatically generated with 
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML
  * Schema.
  * $Id$
  */
 
-/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
-*/
-
 package jalview.binding;
 
   //---------------------------------/
@@ -42,7 +23,7 @@ import org.xml.sax.ContentHandler;
 
 /**
  * Class JSeq.
- *
+ * 
  * @version $Revision$ $Date$
  */
 public class JSeq implements java.io.Serializable {
@@ -108,137 +89,137 @@ public class JSeq implements java.io.Serializable {
 
     /**
      * Method deleteColour
-     *
+     * 
      */
     public void deleteColour()
     {
         this._has_colour= false;
-    } //-- void deleteColour()
+    } //-- void deleteColour() 
 
     /**
      * Method deleteEnd
-     *
+     * 
      */
     public void deleteEnd()
     {
         this._has_end= false;
-    } //-- void deleteEnd()
+    } //-- void deleteEnd() 
 
     /**
      * Method deleteId
-     *
+     * 
      */
     public void deleteId()
     {
         this._has_id= false;
-    } //-- void deleteId()
+    } //-- void deleteId() 
 
     /**
      * Method deleteStart
-     *
+     * 
      */
     public void deleteStart()
     {
         this._has_start= false;
-    } //-- void deleteStart()
+    } //-- void deleteStart() 
 
     /**
      * Returns the value of field 'colour'.
-     *
+     * 
      * @return int
      * @return the value of field 'colour'.
      */
     public int getColour()
     {
         return this._colour;
-    } //-- int getColour()
+    } //-- int getColour() 
 
     /**
      * Returns the value of field 'end'.
-     *
+     * 
      * @return int
      * @return the value of field 'end'.
      */
     public int getEnd()
     {
         return this._end;
-    } //-- int getEnd()
+    } //-- int getEnd() 
 
     /**
      * Returns the value of field 'id'.
-     *
+     * 
      * @return int
      * @return the value of field 'id'.
      */
     public int getId()
     {
         return this._id;
-    } //-- int getId()
+    } //-- int getId() 
 
     /**
      * Returns the value of field 'start'.
-     *
+     * 
      * @return int
      * @return the value of field 'start'.
      */
     public int getStart()
     {
         return this._start;
-    } //-- int getStart()
+    } //-- int getStart() 
 
     /**
      * Method hasColour
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @return boolean
      */
     public boolean hasColour()
     {
         return this._has_colour;
-    } //-- boolean hasColour()
+    } //-- boolean hasColour() 
 
     /**
      * Method hasEnd
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @return boolean
      */
     public boolean hasEnd()
     {
         return this._has_end;
-    } //-- boolean hasEnd()
+    } //-- boolean hasEnd() 
 
     /**
      * Method hasId
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @return boolean
      */
     public boolean hasId()
     {
         return this._has_id;
-    } //-- boolean hasId()
+    } //-- boolean hasId() 
 
     /**
      * Method hasStart
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @return boolean
      */
     public boolean hasStart()
     {
         return this._has_start;
-    } //-- boolean hasStart()
+    } //-- boolean hasStart() 
 
     /**
      * Method isValid
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @return boolean
      */
     public boolean isValid()
@@ -250,85 +231,85 @@ public class JSeq implements java.io.Serializable {
             return false;
         }
         return true;
-    } //-- boolean isValid()
+    } //-- boolean isValid() 
 
     /**
      * Method marshal
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @param out
      */
     public void marshal(java.io.Writer out)
         throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
     {
-
+        
         Marshaller.marshal(this, out);
-    } //-- void marshal(java.io.Writer)
+    } //-- void marshal(java.io.Writer) 
 
     /**
      * Method marshal
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @param handler
      */
     public void marshal(org.xml.sax.ContentHandler handler)
         throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
     {
-
+        
         Marshaller.marshal(this, handler);
-    } //-- void marshal(org.xml.sax.ContentHandler)
+    } //-- void marshal(org.xml.sax.ContentHandler) 
 
     /**
      * Sets the value of field 'colour'.
-     *
+     * 
      * @param colour the value of field 'colour'.
      */
     public void setColour(int colour)
     {
         this._colour = colour;
         this._has_colour = true;
-    } //-- void setColour(int)
+    } //-- void setColour(int) 
 
     /**
      * Sets the value of field 'end'.
-     *
+     * 
      * @param end the value of field 'end'.
      */
     public void setEnd(int end)
     {
         this._end = end;
         this._has_end = true;
-    } //-- void setEnd(int)
+    } //-- void setEnd(int) 
 
     /**
      * Sets the value of field 'id'.
-     *
+     * 
      * @param id the value of field 'id'.
      */
     public void setId(int id)
     {
         this._id = id;
         this._has_id = true;
-    } //-- void setId(int)
+    } //-- void setId(int) 
 
     /**
      * Sets the value of field 'start'.
-     *
+     * 
      * @param start the value of field 'start'.
      */
     public void setStart(int start)
     {
         this._start = start;
         this._has_start = true;
-    } //-- void setStart(int)
+    } //-- void setStart(int) 
 
     /**
      * Method unmarshal
-     *
-     *
-     *
+     * 
+     * 
+     * 
      * @param reader
      * @return Object
      */
@@ -336,17 +317,17 @@ public class JSeq implements java.io.Serializable {
         throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
     {
         return (jalview.binding.JSeq) Unmarshaller.unmarshal(jalview.binding.JSeq.class, reader);
-    } //-- java.lang.Object unmarshal(java.io.Reader)
+    } //-- java.lang.Object unmarshal(java.io.Reader) 
 
     /**
      * Method validate
-     *
+     * 
      */
     public void validate()
         throws org.exolab.castor.xml.ValidationException
     {
         org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
         validator.validate(this);
-    } //-- void validate()
+    } //-- void validate() 
 
 }