X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbinding%2FJalviewModelSequence.java;h=9020ce2e420dd268deff2f4ea2176087d136c84f;hb=3d0101179759ef157b088ea135423cd909512d9f;hp=f8207ebfaf1b13b1cbe982721dadf512024d23c6;hpb=d423f22792e47dbc800ae220a58677f988971d06;p=jalview.git

diff --git a/src/jalview/binding/JalviewModelSequence.java b/src/jalview/binding/JalviewModelSequence.java
old mode 100755
new mode 100644
index f8207eb..9020ce2
--- a/src/jalview/binding/JalviewModelSequence.java
+++ b/src/jalview/binding/JalviewModelSequence.java
@@ -1,20 +1,10 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
- * 
- * This file is part of Jalview.
- * 
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
- * PURPOSE.  See the GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * This class was automatically generated with 
+ * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
+ * Schema.
+ * $Id$
  */
+
 package jalview.binding;
 
 //---------------------------------/
@@ -296,9 +286,9 @@ public class JalviewModelSequence implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._JGroupList.size())
     {
-      throw new IndexOutOfBoundsException("getJGroup: Index value '"
-              + index + "' not in range [0.."
-              + (this._JGroupList.size() - 1) + "]");
+      throw new IndexOutOfBoundsException(
+              "getJGroup: Index value '" + index + "' not in range [0.."
+                      + (this._JGroupList.size() - 1) + "]");
     }
 
     return (jalview.binding.JGroup) _JGroupList.get(index);
@@ -483,9 +473,9 @@ public class JalviewModelSequence implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._viewportList.size())
     {
-      throw new IndexOutOfBoundsException("getViewport: Index value '"
-              + index + "' not in range [0.."
-              + (this._viewportList.size() - 1) + "]");
+      throw new IndexOutOfBoundsException(
+              "getViewport: Index value '" + index + "' not in range [0.."
+                      + (this._viewportList.size() - 1) + "]");
     }
 
     return (jalview.binding.Viewport) _viewportList.get(index);
@@ -753,9 +743,9 @@ public class JalviewModelSequence implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._JGroupList.size())
     {
-      throw new IndexOutOfBoundsException("setJGroup: Index value '"
-              + index + "' not in range [0.."
-              + (this._JGroupList.size() - 1) + "]");
+      throw new IndexOutOfBoundsException(
+              "setJGroup: Index value '" + index + "' not in range [0.."
+                      + (this._JGroupList.size() - 1) + "]");
     }
 
     this._JGroupList.set(index, vJGroup);
@@ -906,9 +896,9 @@ public class JalviewModelSequence implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._viewportList.size())
     {
-      throw new IndexOutOfBoundsException("setViewport: Index value '"
-              + index + "' not in range [0.."
-              + (this._viewportList.size() - 1) + "]");
+      throw new IndexOutOfBoundsException(
+              "setViewport: Index value '" + index + "' not in range [0.."
+                      + (this._viewportList.size() - 1) + "]");
     }
 
     this._viewportList.set(index, vViewport);
@@ -946,8 +936,8 @@ public class JalviewModelSequence implements java.io.Serializable
           throws org.exolab.castor.xml.MarshalException,
           org.exolab.castor.xml.ValidationException
   {
-    return (jalview.binding.JalviewModelSequence) Unmarshaller.unmarshal(
-            jalview.binding.JalviewModelSequence.class, reader);
+    return (jalview.binding.JalviewModelSequence) Unmarshaller
+            .unmarshal(jalview.binding.JalviewModelSequence.class, reader);
   }
 
   /**