X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbinding%2FJalviewUserColours.java;h=8df0d448a22418171f6115b7470a7cba5e178a8f;hb=b8d09897dacc7b0ad203982b4578e2c1d8929142;hp=676a62358dc47c9b53aa43d389f357713f9fa214;hpb=c68ce4c63bd79f23b87aac3eb0afa7f6b42a3098;p=jalview.git

diff --git a/src/jalview/binding/JalviewUserColours.java b/src/jalview/binding/JalviewUserColours.java
index 676a623..8df0d44 100755
--- a/src/jalview/binding/JalviewUserColours.java
+++ b/src/jalview/binding/JalviewUserColours.java
@@ -1,38 +1,39 @@
 /*
- * This class was automatically generated with 
+ * This class was automatically generated with
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML
  * Schema.
  * $Id$
  */
-
 package jalview.binding;
 
-  //---------------------------------/
- //- Imported classes and packages -/
-//---------------------------------/
+import org.exolab.castor.xml.MarshalException;
+import org.exolab.castor.xml.Marshaller;
+import org.exolab.castor.xml.Unmarshaller;
+import org.exolab.castor.xml.ValidationException;
 
+import org.xml.sax.ContentHandler;
+
+//---------------------------------/
+//- Imported classes and packages -/
+//---------------------------------/
 import java.io.IOException;
 import java.io.Reader;
 import java.io.Serializable;
 import java.io.Writer;
+
 import java.util.Enumeration;
 import java.util.Vector;
-import org.exolab.castor.xml.MarshalException;
-import org.exolab.castor.xml.Marshaller;
-import org.exolab.castor.xml.Unmarshaller;
-import org.exolab.castor.xml.ValidationException;
-import org.xml.sax.ContentHandler;
+
 
 /**
  * Class JalviewUserColours.
- * 
+ *
  * @version $Revision$ $Date$
  */
-public class JalviewUserColours implements java.io.Serializable {
-
-
-      //--------------------------/
-     //- Class/Member Variables -/
+public class JalviewUserColours implements java.io.Serializable
+{
+    //--------------------------/
+    //- Class/Member Variables -/
     //--------------------------/
 
     /**
@@ -40,39 +41,38 @@ public class JalviewUserColours implements java.io.Serializable {
      */
     private java.util.Vector _colourList;
 
-
-      //----------------/
-     //- Constructors -/
     //----------------/
-
-    public JalviewUserColours() {
+    //- Constructors -/
+    //----------------/
+    public JalviewUserColours()
+    {
         super();
         _colourList = new Vector();
-    } //-- jalview.binding.JalviewUserColours()
+    }
 
-
-      //-----------/
-     //- Methods -/
+    //-- jalview.binding.JalviewUserColours()
     //-----------/
 
     /**
-     * Method addColour
-     * 
-     * 
-     * 
-     * @param vColour
+     * DOCUMENT ME!
+     *
+     * @param vColour DOCUMENT ME!
+     *
+     * @throws java.lang.IndexOutOfBoundsException DOCUMENT ME!
      */
     public void addColour(jalview.binding.Colour vColour)
         throws java.lang.IndexOutOfBoundsException
     {
         _colourList.addElement(vColour);
-    } //-- void addColour(jalview.binding.Colour) 
+    }
+
+    //-- void addColour(jalview.binding.Colour) 
 
     /**
      * Method addColour
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param index
      * @param vColour
      */
@@ -80,25 +80,29 @@ public class JalviewUserColours implements java.io.Serializable {
         throws java.lang.IndexOutOfBoundsException
     {
         _colourList.insertElementAt(vColour, index);
-    } //-- void addColour(int, jalview.binding.Colour) 
+    }
+
+    //-- void addColour(int, jalview.binding.Colour) 
 
     /**
      * Method enumerateColour
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @return Enumeration
      */
     public java.util.Enumeration enumerateColour()
     {
         return _colourList.elements();
-    } //-- java.util.Enumeration enumerateColour() 
+    }
+
+    //-- java.util.Enumeration enumerateColour() 
 
     /**
      * Method getColour
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param index
      * @return Colour
      */
@@ -106,102 +110,123 @@ public class JalviewUserColours implements java.io.Serializable {
         throws java.lang.IndexOutOfBoundsException
     {
         //-- check bounds for index
-        if ((index < 0) || (index > _colourList.size())) {
+        if ((index < 0) || (index > _colourList.size()))
+        {
             throw new IndexOutOfBoundsException();
         }
-        
+
         return (jalview.binding.Colour) _colourList.elementAt(index);
-    } //-- jalview.binding.Colour getColour(int) 
+    }
+
+    //-- jalview.binding.Colour getColour(int) 
 
     /**
      * Method getColour
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @return Colour
      */
     public jalview.binding.Colour[] getColour()
     {
         int size = _colourList.size();
         jalview.binding.Colour[] mArray = new jalview.binding.Colour[size];
-        for (int index = 0; index < size; index++) {
+
+        for (int index = 0; index < size; index++)
+        {
             mArray[index] = (jalview.binding.Colour) _colourList.elementAt(index);
         }
+
         return mArray;
-    } //-- jalview.binding.Colour[] getColour() 
+    }
+
+    //-- jalview.binding.Colour[] getColour() 
 
     /**
      * Method getColourCount
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @return int
      */
     public int getColourCount()
     {
         return _colourList.size();
-    } //-- int getColourCount() 
+    }
+
+    //-- int getColourCount() 
 
     /**
      * Method isValid
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @return boolean
      */
     public boolean isValid()
     {
-        try {
+        try
+        {
             validate();
         }
-        catch (org.exolab.castor.xml.ValidationException vex) {
+        catch (org.exolab.castor.xml.ValidationException vex)
+        {
             return false;
         }
+
         return true;
-    } //-- boolean isValid() 
+    }
+
+    //-- boolean isValid() 
 
     /**
      * Method marshal
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param out
      */
     public void marshal(java.io.Writer out)
-        throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
+        throws org.exolab.castor.xml.MarshalException, 
+            org.exolab.castor.xml.ValidationException
     {
-        
         Marshaller.marshal(this, out);
-    } //-- void marshal(java.io.Writer) 
+    }
+
+    //-- void marshal(java.io.Writer) 
 
     /**
      * Method marshal
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param handler
      */
     public void marshal(org.xml.sax.ContentHandler handler)
-        throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
+        throws java.io.IOException, org.exolab.castor.xml.MarshalException, 
+            org.exolab.castor.xml.ValidationException
     {
-        
         Marshaller.marshal(this, handler);
-    } //-- void marshal(org.xml.sax.ContentHandler) 
+    }
+
+    //-- void marshal(org.xml.sax.ContentHandler) 
 
     /**
      * Method removeAllColour
-     * 
+     *
      */
     public void removeAllColour()
     {
         _colourList.removeAllElements();
-    } //-- void removeAllColour() 
+    }
+
+    //-- void removeAllColour() 
 
     /**
      * Method removeColour
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param index
      * @return Colour
      */
@@ -209,14 +234,17 @@ public class JalviewUserColours implements java.io.Serializable {
     {
         java.lang.Object obj = _colourList.elementAt(index);
         _colourList.removeElementAt(index);
+
         return (jalview.binding.Colour) obj;
-    } //-- jalview.binding.Colour removeColour(int) 
+    }
+
+    //-- jalview.binding.Colour removeColour(int) 
 
     /**
      * Method setColour
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param index
      * @param vColour
      */
@@ -224,51 +252,63 @@ public class JalviewUserColours implements java.io.Serializable {
         throws java.lang.IndexOutOfBoundsException
     {
         //-- check bounds for index
-        if ((index < 0) || (index > _colourList.size())) {
+        if ((index < 0) || (index > _colourList.size()))
+        {
             throw new IndexOutOfBoundsException();
         }
+
         _colourList.setElementAt(vColour, index);
-    } //-- void setColour(int, jalview.binding.Colour) 
+    }
+
+    //-- void setColour(int, jalview.binding.Colour) 
 
     /**
      * Method setColour
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param colourArray
      */
     public void setColour(jalview.binding.Colour[] colourArray)
     {
         //-- copy array
         _colourList.removeAllElements();
-        for (int i = 0; i < colourArray.length; i++) {
+
+        for (int i = 0; i < colourArray.length; i++)
+        {
             _colourList.addElement(colourArray[i]);
         }
-    } //-- void setColour(jalview.binding.Colour) 
+    }
+
+    //-- void setColour(jalview.binding.Colour) 
 
     /**
      * Method unmarshal
-     * 
-     * 
-     * 
+     *
+     *
+     *
      * @param reader
      * @return Object
      */
     public static java.lang.Object unmarshal(java.io.Reader reader)
-        throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
+        throws org.exolab.castor.xml.MarshalException, 
+            org.exolab.castor.xml.ValidationException
     {
-        return (jalview.binding.JalviewUserColours) Unmarshaller.unmarshal(jalview.binding.JalviewUserColours.class, reader);
-    } //-- java.lang.Object unmarshal(java.io.Reader) 
+        return (jalview.binding.JalviewUserColours) Unmarshaller.unmarshal(jalview.binding.JalviewUserColours.class,
+            reader);
+    }
+
+    //-- java.lang.Object unmarshal(java.io.Reader) 
 
     /**
      * Method validate
-     * 
+     *
      */
-    public void validate()
-        throws org.exolab.castor.xml.ValidationException
+    public void validate() throws org.exolab.castor.xml.ValidationException
     {
         org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
         validator.validate(this);
-    } //-- void validate() 
+    }
 
+    //-- void validate() 
 }